Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08] 1,054 sequences; 40,676,380 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq98 114 5e-20 >seq98 Length=95448 Score = 114 bits (126), Expect = 5e-20 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 349078 GAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAA 349137 |||||| |||||||||| ||||| || || || |||||||||| | || |||||||| Sbjct 25460 GAGAATTTCCTTGAGTCGGGGCACACCGAGTGTGACGTTCTTGGAAGACACACCGGCAAA 25519 Query 349138 GTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGAT 349197 ||||||||| | || |||| ||||||| |||||| || ||| ||||| | || |||| Sbjct 25520 GTGGAAGGTGTTCAGCGTCATCTGCGTGGCGGGCTCACCAATGGACTGGGCAGCAAGGAC 25579 Query 349198 GCCTACCATCTCGCCGGG 349215 || ||||| || ||||| Sbjct 25580 ACCAACCATTTCACCGGG 25597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084710360239092