Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq4 111 7e-19
seq7 89.7 2e-12
>seq4
Length=3617723
Score = 111 bits (122), Expect = 7e-19
Identities = 109/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 349075 GTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGC 349134
|| |||||| |||||||| | ||||| || || || |||||||||| | || || ||
Sbjct 1843988 GTTGAGAATTTCCTTGAGACGGGGCACACCGAGCGTGACGTTCTTGGAAGACACACCAGC 1843929
Query 349135 AAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAG 349194
||||||||||| | || |||| ||||||| |||||| |||||| |||| |||||||
Sbjct 1843928 GAAGTGGAAGGTGTTCAGAGTCATCTGCGTGGCGGGCTCACCGATGGACTGAGCCGCGAG 1843869
Query 349195 GATGCCTACCATCTCGCCGGG 349215
|| || ||||| || |||||
Sbjct 1843868 GACACCGACCATTTCACCGGG 1843848
>seq7
Length=2761852
Score = 89.7 bits (98), Expect = 2e-12
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 349096 GGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGT 349155
||| || ||||| ||||||||||| |||| | |||||| || |||||||| | ||| ||
Sbjct 1115678 GGGGATACCCAGTGTCACGTTCTTCGCCGAGTGGCCGGCCAAATGGAAGGTGTTGAGCGT 1115737
Query 349156 CAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGG 349215
|| |||||| |||||||||| | | ||||| || | |||||| || ||| || ||
Sbjct 1115738 CATCTGCGTCGACGGCTCGCCGACGGATTGGCCGGCAACGATGCCGACGGCCTCCCCAGG 1115797
Query 349216 CGCG 349219
| ||
Sbjct 1115798 CTCG 1115801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084738844291374
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |