Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq725 704 0.0
seq154 156 2e-35
>seq725
Length=5523
Score = 704 bits (780), Expect = 0.0
Identities = 569/675 (84%), Gaps = 16/675 (2%)
Strand=Plus/Plus
Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
||| |||| ||| |||||||||||||||||||||| |||||||||||| |||| |||||
Sbjct 1912 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATG 1971
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1972 GGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 2031
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192
|||||||||||||||||||| ||| |||||| |||||| || ||||||||||||||||||
Sbjct 2032 GATCGAAAGATGAAAAGCACCTTGAAAAGAGGGTTAAATAGTACGTGAAATTGTTGAAAG 2091
Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCAC 251
||||||||||| |||||||||| ||| | | ||| || || ||| |||||||||
Sbjct 2092 GGAAGCGCTTGTGACCAGACTTGGGCGCGGCGGATCATCCGGGGTTCTC-CCCGGTGCAC 2150
Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCG-GGCGGTCGGATAAAGGCCCCGGGAATGTGG 310
| | | | |||||||||||||| ||| |||| ||| |||||| |||||| ||||
Sbjct 2151 TTCGCCGTGTCCAGGCCAGCATCAGTTCGTCGCGG-GGGAAAAAGGCTTCGGGAACGTGG 2209
Query 311 CCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCG 369
| ||| | ||| ||||||||||||| | ||| | || || |||||||||| |||
Sbjct 2210 CTCCC--CTGGGAGTGTTATAGCCCGTTGCATAATAC--CCTGCGGTGGACTGAGGACCG 2265
Query 370 CGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429
||| | || ||||||||||||||||||| |||| ||||||||| ||||||||||||
Sbjct 2266 CGCATCTGCAAGGATGCTGGCGTAATGGTCACCAGCGACCCGTCTTGAAACACGGACCAA 2325
Query 430 GGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAA 488
|||||| | || |||||||||||| ||||||||||||| | |||||||||||||||||
Sbjct 2326 GGAGTC-GTCTTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAA 2384
Query 489 CGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTT 548
|| ||||| || | || ||| ||||||||||||||||||| ||||||||||||
Sbjct 2385 CGCAGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTT 2440
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||||||||||||| | |||||||||||| ||||||||||||||| |||||||||||
Sbjct 2441 GAGTAAGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAG 2500
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2501 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATA 2560
Query 669 TGGGTATAGGGGCGA 683
|||| || |||||||
Sbjct 2561 TGGGCATGGGGGCGA 2575
>seq154
Length=60778
Score = 156 bits (172), Expect = 2e-35
Identities = 179/237 (76%), Gaps = 9/237 (4%)
Strand=Plus/Minus
Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504
|||| ||| | | ||||||| ||| | |||| |||||||||| || ||||| | | |
Sbjct 9766 TGCGGGTGCTCGAGTGTCAACCCCCTACGCGCGATGAAAGTGAGCGCAGGTGA-ATCGCT 9708
Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564
| || | || ||| | ||||||||||||| || |||||| ||||| |||| ||||
Sbjct 9707 TCAGCG--CATCATTGTCCGATCCTGATGTTCTCCGATGGACTTGAGCAAGATCATACGC 9650
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA-AGCCAGAGGAAA----- 618
| |||||||||||| |||||| || | | || | || || | ||||| |
Sbjct 9649 GGCCGGACCCGAAAGAAGGTGAAGCATTTCCGTATGAGTCGAGAGTCGGAGGATAGGATA 9590
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675
||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||
Sbjct 9589 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCAT 9533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079981016750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |