Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq725 704 0.0 seq154 156 2e-35 >seq725 Length=5523 Score = 704 bits (780), Expect = 0.0 Identities = 569/675 (84%), Gaps = 16/675 (2%) Strand=Plus/Plus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||| ||||| Sbjct 1912 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATG 1971 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1972 GGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 2031 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||| ||| |||||| |||||| || |||||||||||||||||| Sbjct 2032 GATCGAAAGATGAAAAGCACCTTGAAAAGAGGGTTAAATAGTACGTGAAATTGTTGAAAG 2091 Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCAC 251 ||||||||||| |||||||||| ||| | | ||| || || ||| ||||||||| Sbjct 2092 GGAAGCGCTTGTGACCAGACTTGGGCGCGGCGGATCATCCGGGGTTCTC-CCCGGTGCAC 2150 Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCG-GGCGGTCGGATAAAGGCCCCGGGAATGTGG 310 | | | | |||||||||||||| ||| |||| ||| |||||| |||||| |||| Sbjct 2151 TTCGCCGTGTCCAGGCCAGCATCAGTTCGTCGCGG-GGGAAAAAGGCTTCGGGAACGTGG 2209 Query 311 CCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCG 369 | ||| | ||| ||||||||||||| | ||| | || || |||||||||| ||| Sbjct 2210 CTCCC--CTGGGAGTGTTATAGCCCGTTGCATAATAC--CCTGCGGTGGACTGAGGACCG 2265 Query 370 CGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429 ||| | || ||||||||||||||||||| |||| ||||||||| |||||||||||| Sbjct 2266 CGCATCTGCAAGGATGCTGGCGTAATGGTCACCAGCGACCCGTCTTGAAACACGGACCAA 2325 Query 430 GGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAA 488 |||||| | || |||||||||||| ||||||||||||| | ||||||||||||||||| Sbjct 2326 GGAGTC-GTCTTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAA 2384 Query 489 CGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTT 548 || ||||| || | || ||| ||||||||||||||||||| |||||||||||| Sbjct 2385 CGCAGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTT 2440 Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||| Sbjct 2441 GAGTAAGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAG 2500 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2501 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATA 2560 Query 669 TGGGTATAGGGGCGA 683 |||| || ||||||| Sbjct 2561 TGGGCATGGGGGCGA 2575 >seq154 Length=60778 Score = 156 bits (172), Expect = 2e-35 Identities = 179/237 (76%), Gaps = 9/237 (4%) Strand=Plus/Minus Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504 |||| ||| | | ||||||| ||| | |||| |||||||||| || ||||| | | | Sbjct 9766 TGCGGGTGCTCGAGTGTCAACCCCCTACGCGCGATGAAAGTGAGCGCAGGTGA-ATCGCT 9708 Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 | || | || ||| | ||||||||||||| || |||||| ||||| |||| |||| Sbjct 9707 TCAGCG--CATCATTGTCCGATCCTGATGTTCTCCGATGGACTTGAGCAAGATCATACGC 9650 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA-AGCCAGAGGAAA----- 618 | |||||||||||| |||||| || | | || | || || | ||||| | Sbjct 9649 GGCCGGACCCGAAAGAAGGTGAAGCATTTCCGTATGAGTCGAGAGTCGGAGGATAGGATA 9590 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || Sbjct 9589 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATGGGCAT 9533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079981016750