Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1 129 1e-27 >seq1 Length=45472 Score = 129 bits (142), Expect = 1e-27 Identities = 196/275 (71%), Gaps = 8/275 (3%) Strand=Plus/Plus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||| |||| |||||| ||| ||||||||||||||| | |||||||| |||| Sbjct 22273 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 22332 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| | Sbjct 22333 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 22392 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC----TTCGCGTTAGCTAAC 186 | |||| ||||||| || ||||||| ||| || | | | | || || Sbjct 22393 CA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCTACATCAAATATTAATATATTCAAT 22451 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCGTG 245 ||| |||||| |||||||||||||| |||||| ||||| | | ||| | Sbjct 22452 TATATCTGTTAACCAGCCGGCACCGGGCAGATATCACACTTTATACTTAGATTTTTAATC 22511 Query 246 TTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 ||| ||| ||||||||||||| | |||||||||| Sbjct 22512 TTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 22546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260788841920