Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 1e-16 >seq1 Length=45472 Score = 93.3 bits (102), Expect = 1e-16 Identities = 140/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| | Sbjct 27571 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATGC 27512 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413 | |||||| | |||||| | || | |||| |||| || ||| | | | | || Sbjct 27511 CTGGACAAAGAGATGCGAAAATGTGAATTTAAGCTAATCTCAAAAAACAGGATATAAATT 27452 Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||||||||||| || ||||||||||||| | ||| ||||||||||| ||| Sbjct 27451 TTAAGGATTGTAGTCTGAAATTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATC 27392 Query 471 AGCATGCTACGGTGAAT 487 | |||| ||||||||| Sbjct 27391 ACCATGTCACGGTGAAT 27375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503986689600