Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq725 488 9e-136 seq621 273 4e-71 >seq725 Length=5523 Score = 488 bits (540), Expect = 9e-136 Identities = 286/295 (97%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 4660 TACTAAGCTCAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 4602 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4601 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 4542 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 4541 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 4482 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4481 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 4422 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4421 CAAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 4367 >seq621 Length=30837 Score = 273 bits (302), Expect = 4e-71 Identities = 191/213 (90%), Gaps = 12/213 (6%) Strand=Plus/Plus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 25879 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGT-TGATAGGAAGAGCCGA 25937 Query 151 CATCGAAGGATCAAAAAGCAACGTCG----CTATGAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||||||||||| |||||| |||| |||||||||| |||||||||||| | Sbjct 25938 CATCGAAGGATCAAAAAGCGACGTCGCTACCTATAAACGCTTGGCCGCCACAAGCCAGGT 25997 Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 ||||||| ||||| ||||||||||||||||||||||| | |||||||||| | ||||||| Sbjct 25998 ATCCCTG-GGTAAGTTTTCTGGCACCTCTAGCCTCAAGTGTCGAGGGACT-AGGGATCGA 26055 Query 267 TAGGCC-----ACACTTTCATGGTTTGTATTCA 294 |||||| |||||||||||| |||||||| Sbjct 26056 TAGGCCACACGACACTTTCATGGACTGTATTCA 26088 Score = 113 bits (124), Expect = 8e-23 Identities = 75/82 (91%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTA 70 ||||||||||| || || |||||||||||||||||||||||||||||||| |||||| | Sbjct 25275 AATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCACAACGGTCGA 25333 Query 71 AACCCAGCTCACGTTCCCTATT 92 || ||||||||||||||||||| Sbjct 25334 AAGCCAGCTCACGTTCCCTATT 25355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854392438560