Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq736 356 2e-93 seq804 230 2e-55 >seq736 Length=134049 Score = 356 bits (394), Expect = 2e-93 Identities = 1225/1888 (65%), Gaps = 68/1888 (4%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||||||| | ||| || |||| ||| | || |||||||||||||| Sbjct 48371 ATCGACGGTGAACTGGATAGGCGCAGCTGCGGCCTGGGTACGGAGGTAGTACATGCCGGT 48312 Query 65137 CTTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGC 65194 |||||| || ||| ||| | ||| ||||| | || | || |||| | | || Sbjct 48311 CTTGAGACCGAGCTT-CCAGCCGGTGAAGTGCAT-GCTGGTGATCTTGCCCATCGTGGGG 48254 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || || || || || | ||||| ||| |||||| || ||||||||| || ||| Sbjct 48253 TCCTTCATGTGGATGTTTAGGGACTGGGACTGGTCGATGAAAGCACCACGATCAGCCGCC 48194 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGC----GACGTAC 65310 || | | ||| |||| ||||||||||||||||||||||||||| || || | Sbjct 48193 ATCTGGACGATTTGACGCTGAGATATCTCCCAGACGGTCTTGTACAGGGCCTTGATGT-C 48135 Query 65311 CTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACG 65370 ||| || || | ||||| ||||| || || ||||| ||||| || Sbjct 48134 CTCG---GGGATGTTGGGAATGTTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTCTT 48078 Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATGTT---GAA-CCAAGTGACGATTGA 65426 ||| | || ||||||| || |||| || | | ||| ||||| | |||| Sbjct 48077 CATGGCGTCAGACCACAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAAGGG----TTGA 48022 Query 65427 TGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAA 65486 || |||||||| || | || ||||| || ||||||||||| ||| ||| || | Sbjct 48021 CAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGA 47962 Query 65487 AGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACA 65546 || |||| ||||||| ||||| || | ||| ||||| ||||| |||||||| | || Sbjct 47961 AGCATTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTGGGCATAGGAGCGACGAGCA 47902 Query 65547 ATGAGTTTCGCAATCCGT--TCATTTCAATGTTG--TGACGCAATTCGTCCCAGTTCCAC 65602 | ||| || | |||| || || || | ||| | | |||||| | |||| Sbjct 47901 AGCTGTTGCGGACACCGTGCTCCTTGATCTGCTCCTTGAGGGA----GTCCCACTCCCAC 47846 Query 65603 ATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCC 65662 | ||| || | | ||| |||||| || | || ||| | || | || Sbjct 47845 A--GGT----CGGAGGGCTTGACGTCCCACATGTCGTACTGGAGGATACCCTCAGATGCA 47792 Query 65663 GGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTT----GACAGCTGGT 65718 || || || ||| || || ||||| ||||||||| | | |||| Sbjct 47791 GGCGATCCCTTGAACGATTCATAGGGGCCCTCGACCTTGGCAATCTCCATGGAAGCT--- 47735 Query 65719 CTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATC 65778 || || |||||| |||||||||||||| || | || || || || ||||| Sbjct 47734 -TCAAGGGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCTCGGG 47676 Query 65779 GCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACC 65838 ||| | |||| || || || || | ||| || ||||| || || || | ||| Sbjct 47675 AGACTCAAAGGGCAGACGCAGAGCGAGGAACGCGTCAGCAAGACCCTGGACACCGACACC 47616 Query 65839 GATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATC 65898 ||| || || || |||| ||| | ||||| || ||||||| || | ||| Sbjct 47615 GATAGGTCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTCGACGGGGTAGTGGTTCACATC 47556 Query 65899 GATAATGCGATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAAT 65957 ||| ||||| || | ||||| ||||| | || | ||| || || ||| | Sbjct 47555 GATGATGCGGTTGAGGTTGCGGACGACCACCTTGGTGACTTCGTGAAGCTTCTT-GAAGT 47497 Query 65958 CAAAATGTTTAGGA-CGATCG--GGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAG 66014 | ||| | | ||| | ||| | ||||| ||||||||| |||| Sbjct 47496 CG-------TAGCAGCCCTCGTTGTAGT--------CGACAAAGGCGGGAAGGGCCAGAG 47452 Query 66015 ATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACA 66074 | || | |||||||||||| | |||||| || || ||||| | || || ||||| | Sbjct 47451 AGGCCAAGTTGCAGACAGCGACCTCGTCGGGGGCACAGTACTCAATGATCTCAGTGCAGA 47392 Query 66075 GATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCT 66134 | ||| || ||| ||||||||||| |||| || || |||||||| ||||| |||| Sbjct 47391 GGTTAGAGCTGCGGATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCT 47332 Query 66135 TGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAG 66194 |||| | |||| | || | || ||||| |||| ||| | ||||| || ||| || Sbjct 47331 TGTAAAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCCAGGATGGAGTACCACAGCT 47272 Query 66195 CGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGT 66253 | || | || | ||| || | || | | ||||| | |||||| || Sbjct 47271 TCTGAGCACGGATGGT-CTTACGACCACGTCCCTCCCTCTCGTACTTTTCGTACAGAGCC 47213 Query 66254 TCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGAC 66313 || || || || | || | |||| || || | || || ||||| |||| | Sbjct 47212 TCAAACTCCTCGCCGTAGCAGTCAGCAAGACCAGGGCATTCGTTGGGGCACATGAGCGTC 47153 Query 66314 CAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAG 66373 || || | || || ||||| ||| || ||||| || ||||| || || ||| Sbjct 47152 CAGTCCAAGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCACAGAGCAAGGAAC 47093 Query 66374 AGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAG 66433 | ||||| || || |||||| ||||||| || ||||| | || ||||| |||||| Sbjct 47092 AAGTCGCGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAAGTCAAAG 47033 Query 66434 ATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCT 66493 | |||||| ||||| || || ||||||||||| || | || ||| ||| |||||| Sbjct 47032 ACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTGCCACCC 46973 Query 66494 TGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGAT 66553 ||||||||||| || || ||||||||||| |||| ||| || | | ||||| || Sbjct 46972 TGGTCGACGTATCGGGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGAG 46913 Query 66554 TTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCA 66613 |||| ||||||||| ||||| ||| || || || || ||| || |||||||| Sbjct 46912 GTGCCGTTGGTGCCGGCGATGTAGGAGCCAGTGGCACGGATGCGGTGGACGTTCAGACCG 46853 Query 66614 ATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGT 66671 || ||||| ||| |||| || || ||||| || | || || | || || | Sbjct 46852 ATGCCACCAGCCATCTTGGAAATCATGGCACA--CGTCTTCAGGGTGTCATAGATACCCT 46795 Query 66672 CAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGG 66731 ||||| ||| |||| ||| || ||| ||||||| || |||| || || ||| Sbjct 46794 CAATGCTGTCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCTGGGCTTGCGGGGTGC 46735 Query 66732 CGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACG 66791 | || ||||||||| || | ||||| || ||| | | || |||||| | ||| | Sbjct 46734 CAGCATTGAAGAGGGTAGGGGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTGGTATG 46675 Query 66792 TCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGT 66851 |||||| |||| ||||||| || || || || | || |||||| | | || Sbjct 46674 TCTCGAGGACACGCTCAATGTCGTCTCCCCAGATGCCAACGGCCACTCGCATAATCATGT 46615 Query 66852 ATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCT 66911 ||| ||||| ||||| | | | | || | || | ||| || || ||||| |||| Sbjct 46614 GTTGTGGCCGCTCGACAATCTTGCCGTCGAGCTTCAGAAGGTATGATCGCTCCAGCGTCT 46555 Query 66912 TGATACCAAAGTACGAGTAATTGAAATC 66939 ||| |||||||| ||| ||||| || Sbjct 46554 TGAAGCCAAAGTATTGGTAGTTGAAGTC 46527 >seq804 Length=175399 Score = 230 bits (254), Expect = 2e-55 Identities = 582/860 (68%), Gaps = 30/860 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||||||||| || |||||||||||||| | |||||| | || || Sbjct 35701 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAGGAGATTGACCTG 35642 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGA-GCGGTGAACAACATTTCATTA 61201 ||||| ||| || | |||||| | || | | ||| | | ||| || ||||| Sbjct 35641 TCCAAGGACCTGCACGACTGGAACAACCGCCTGAACGATGACGAGAAGTAC--TTCATCT 35584 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 || | |||| ||||| ||||| |||||||| || ||||| ||||| | | || | Sbjct 35583 CTCACATCCTGGCCTTCTTCGCCGCCTCGGACGGCATTGTCAACGAGAACCTGGTCGAGC 35524 Query 61262 GTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 | ||| || | ||||| || | | ||||| || || || |||||||||||||| Sbjct 35523 GCTTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGCTGCTTTTACGGCTTCCAGATCATG 35465 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 |||||||| ||||||| |||| |||| | |||||||| || || |||| ||||| Sbjct 35464 ATGGAGAACATCCACTCCGAGACGTACTCCCTGCTCATCGACACTTATATCAAGGAGCAC 35405 Query 61381 GCGGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACC-GGCGGT-GAAGCGGAAA 61437 | || ||| | | ||||| ||||| ||||| || || || | | | ||| Sbjct 35404 AGCCAGCG-CAACTACCTCTTCAACGCCATTGAGACCATTCCTTGCATTCGCA--AGAAG 35348 Query 61438 GCGGATTGGGC-CTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTG 61494 || || ||||| ||| | ||||| |||| |||| || | |||| | || | Sbjct 35347 GCTGACTGGGCGATTCGA-TGGAT--CCAGGACAAGAACTCGTCCTTTGCCCAGCGTCTC 35291 Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554 | || ||||| | ||||||||| | || ||||| || | |||||| | || || ||| Sbjct 35290 GTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATTTTCTGG 35231 Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614 | ||||| || || || |||||||| |||||||| ||| ||| | || || || ||| Sbjct 35230 CTCAAGAAGCGAGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGAC 35171 Query 61615 GAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG 61674 ||||| |||| || ||||| ||| | || | | | ||| ||| || || Sbjct 35170 GAGGGTCTGCACACGGACTTTGCCTGCCTGC--TGCACTCTC-ACCTGAAGAACCG--CG 35116 Query 61675 TCGG--AGGAGCGTG-TGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTT 61731 | | ||||| ||| | |||| || | || || || ||||| ||||| ||| Sbjct 35115 CCAGCAAGGAG-GTGATTCGTGACATCATCACCGACGCCGTCCGCATCGAGCAGGAGTTT 35057 Query 61732 CTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791 |||| || ||| |||| | | || | |||||||| | || ||| |||||| Sbjct 35056 TTGACCGAAGCTCTGCCTTGCGCCCTGCTGGGCATGAACTCCAACCTCATGAAGCAGTAC 34997 Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851 ||||| ||||| |||||||| ||| |||| | | | || | || | | || || || Sbjct 34996 ATTGAGTTTGTCGCCGACCGCCTGCTGGTAGCTCTCGGCAACGAGAAGGTGTACAAGTCG 34937 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 ||||| ||||| || ||||| | ||||| |||| |||||||| || || || ||| Sbjct 34936 TCCAACCCCTTTGACTTTATGGAGAACATTTCCCTGGGCGGCAAGACCAACTTCTTTGAG 34877 Query 61912 AAACGTGTAGGCGACTATCA 61931 || || || | |||||| || Sbjct 34876 AAGCGCGTCGCCGACTACCA 34857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563711856400