Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq826 107 8e-18
seq744 100 1e-15
>seq826
Length=55858
Score = 107 bits (118), Expect = 8e-18
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 349096 GGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGT 349155
||| || ||||| |||||||||||||||| | |||||| ||||||||||| | ||| ||
Sbjct 9509 GGGGATACCCAGCGTCACGTTCTTGGCCGAGTGGCCGGCCAAGTGGAAGGTGTTGAGCGT 9568
Query 349156 CAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGG 349215
|| |||||| |||||||| | | ||||||| |||| |||||| || ||| |||||
Sbjct 9569 CATCTGCGTCGACGGCTCGCCCACGGACTGGCCGGCGACGATGCCCACGGCCTCTCCGGG 9628
Query 349216 CGCG 349219
| ||
Sbjct 9629 CTCG 9632
>seq744
Length=46994
Score = 100 bits (110), Expect = 1e-15
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 349078 GAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAA 349137
|||||| |||||||| | ||||| || || || |||||||||| | || || |||||
Sbjct 18498 GAGAATTTCCTTGAGACGGGGCACACCGAGCGTGACGTTCTTGGAAGACACACCAGCAAA 18439
Query 349138 GTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGAT 349197
||||||||| | || |||| |||||| ||||| |||||| |||| |||| ||||
Sbjct 18438 GTGGAAGGTGTTCAGAGTCATCTGCGTAGCAGGCTCACCGATGGACTGAGCCGCAAGGAC 18379
Query 349198 GCCTACCATCTCGCCGGG 349215
|| ||||| || |||||
Sbjct 18378 ACCCACCATTTCACCGGG 18361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084714984451230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |