Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq826 107 8e-18 seq744 100 1e-15 >seq826 Length=55858 Score = 107 bits (118), Expect = 8e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 349096 GGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGT 349155 ||| || ||||| |||||||||||||||| | |||||| ||||||||||| | ||| || Sbjct 9509 GGGGATACCCAGCGTCACGTTCTTGGCCGAGTGGCCGGCCAAGTGGAAGGTGTTGAGCGT 9568 Query 349156 CAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGG 349215 || |||||| |||||||| | | ||||||| |||| |||||| || ||| ||||| Sbjct 9569 CATCTGCGTCGACGGCTCGCCCACGGACTGGCCGGCGACGATGCCCACGGCCTCTCCGGG 9628 Query 349216 CGCG 349219 | || Sbjct 9629 CTCG 9632 >seq744 Length=46994 Score = 100 bits (110), Expect = 1e-15 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 349078 GAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAA 349137 |||||| |||||||| | ||||| || || || |||||||||| | || || ||||| Sbjct 18498 GAGAATTTCCTTGAGACGGGGCACACCGAGCGTGACGTTCTTGGAAGACACACCAGCAAA 18439 Query 349138 GTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGAT 349197 ||||||||| | || |||| |||||| ||||| |||||| |||| |||| |||| Sbjct 18438 GTGGAAGGTGTTCAGAGTCATCTGCGTAGCAGGCTCACCGATGGACTGAGCCGCAAGGAC 18379 Query 349198 GCCTACCATCTCGCCGGG 349215 || ||||| || ||||| Sbjct 18378 ACCCACCATTTCACCGGG 18361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084714984451230