Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq2224 167 1e-39
seq946 96.9 2e-18
>seq2224
Length=11470
Score = 167 bits (184), Expect = 1e-39
Identities = 107/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| || ||||||| |||||||| ||
Sbjct 10107 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGCGTCAAAAATGTAACATCGTCC 10166
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 10167 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 10223
>seq946
Length=53277
Score = 96.9 bits (106), Expect = 2e-18
Identities = 92/116 (79%), Gaps = 10/116 (9%)
Strand=Plus/Plus
Query 11 ACTTTGATTTCTCGTAAGGTGCCGA--GCGAGTCAAAATGATAACATCGCCCGATCCCTA 68
||||| ||||||| ||||||||||| | | ||||||| |||||||| ||||| ||||
Sbjct 23893 ACTTTAATTTCTCATAAGGTGCCGAACGTGCGTCAAAAATGTAACATCGTCCGAT-CCTA 23951
Query 69 GTCGGCATAGTTTACGGTTAAGACTAC-------GACGGTATCTGATCGTCTTCGA 117
|| ||||| |||| ||||||||||| ||||||||||||||||||| ||
Sbjct 23952 GTTAGCATATTTTATAGTTAAGACTACTCCGTATGACGGTATCTGATCGTCTTTGA 24007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278393853450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |