Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq2224 361 9e-98
seq97 228 1e-57
>seq2224
Length=11470
Score = 361 bits (400), Expect = 9e-98
Identities = 238/259 (92%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9723 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 9782
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 9783 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGC 9841
Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| || | || |||||||||||||||||||||||||||||||||||| ||||
Sbjct 9842 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 9900
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 9901 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 9960
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 9961 AAAGAGCTCTCAATCTGTC 9979
>seq97
Length=7303
Score = 228 bits (252), Expect = 1e-57
Identities = 165/184 (90%), Gaps = 5/184 (3%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA-GGGCA-TCAC 58
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 183 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAACGGGCAGTCAC 124
Query 59 AGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA 118
||||||||||||||||||||||||||| |||| | |||| |||||||||||||||||||
Sbjct 123 AGACCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCG 65
Query 119 GCCACCAACCATAGTCGAT-GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
|| | ||| || | || |||||||||||||||||||||||||||||||||||| ||
Sbjct 64 GCGTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAA 6
Query 178 TTAA 181
||||
Sbjct 5 TTAA 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796781821755
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |