Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08] 2,355 sequences; 38,137,656 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq844 488 9e-136 seq2067 251 1e-64 seq2079 174 3e-41 >seq844 Length=1552 Score = 488 bits (540), Expect = 9e-136 Identities = 286/295 (97%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| ||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 858 TACTAAGCTCAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 916 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 917 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 976 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 977 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 1036 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1037 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 1096 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1097 CAAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1151 >seq2067 Length=15352 Score = 251 bits (278), Expect = 1e-64 Identities = 182/211 (86%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||||||||||| |||||||||||| || |||||||||| Sbjct 14836 TTAGTGGGTGAACAATCCAACGCTTACCGAATCCTGCTTCGGTATAATGCGAAGAGCCGA 14895 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| || |||||||||||||||||||| | |||||||||| |||||||||| ||||||| Sbjct 14896 CATCCAACGATCAAAAAGCAACGTCGCTGTCAACGCTTGGCCGCCACAAGCCGGTTATCC 14955 Query 211 CTG------TGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 ||| ||| | |||| ||||||||||||||||| ||| ||||||||||| |||||| Sbjct 14956 CTGTGGCACTGGAAGCTTTCCTGGCACCTCTAGCCTCTAATGTCGAGGGACTAGAGGATC 15015 Query 265 GATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||| || ||| |||||| | || ||||||| Sbjct 15016 GATGGGTTACAGTTTCATAGGTTATATTCAC 15046 Score = 104 bits (114), Expect = 4e-20 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 3 CTAAGCGGAATTACCATTGGG-GCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCAT 61 ||| || ||||||||||| | ||| ||||||| |||||| |||||||||| |||||| Sbjct 14310 CTAGGCTCAATTACCATTGCGAGCG--GGTCATCGGTAGGGCAAAACTAACCCGTCTCAC 14367 Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||| ||||||||||||||||||||| Sbjct 14368 GACGGTCTACACCCAGCTCACGTTCCCTATT 14398 >seq2079 Length=80517 Score = 174 bits (192), Expect = 3e-41 Identities = 96/96 (100%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 72 ACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 60 Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAA 167 |||||||||||||||||||||||||||||||||||| Sbjct 61 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAA 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854379878880