Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq2224 163 3e-38
seq1692 91.5 2e-16
>seq2224
Length=11470
Score = 163 bits (180), Expect = 3e-38
Identities = 155/193 (80%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 10367 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 10426
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| |||| |||||||||||| |||| |||||||||||| |||| | ||
Sbjct 10427 AGCATAGGCCTGCCTTGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGCCA 10486
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182
|| ||| |||| ||||| ||| || || || | ||| | || |||| | |||
Sbjct 10487 CACCCAGTGAAGGGCAT-GGGGTTCCGCAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 10545
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 10546 GGTGAGGCGGACC 10558
>seq1692
Length=29617
Score = 91.5 bits (100), Expect = 2e-16
Identities = 58/63 (92%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 65 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 6
Query 66 GGC 68
||
Sbjct 5 AGC 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595186421070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |