Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq2224 273 2e-71
seq1692 145 8e-33
>seq2224
Length=11470
Score = 273 bits (302), Expect = 2e-71
Identities = 176/191 (92%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||| |||||||||||||||||||||||||||| | |||| |||||||| ||||||||||
Sbjct 10480 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCAAGGCAGGCCTATGCTCGAATA 10421
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 10420 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 10362
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||||||||| ||||||||||||||||| |||||||||||
Sbjct 10361 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 10302
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 10301 TTGGATTTATT 10291
>seq1692
Length=29617
Score = 145 bits (160), Expect = 8e-33
Identities = 96/105 (91%), Gaps = 1/105 (1%)
Strand=Plus/Plus
Query 51 TGCTCGAATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110
||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||
Sbjct 2 TGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTT 61
Query 111 CTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAG 155
||||||||| |||||||||| |||| ||| ||||||||| ||||
Sbjct 62 CTAGGACCG-CCGTAATGATTAATAGGGACAGTCGGGGGCATCAG 105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511988319200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |