Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08] 2,355 sequences; 38,137,656 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2224 273 2e-71 seq1692 145 8e-33 >seq2224 Length=11470 Score = 273 bits (302), Expect = 2e-71 Identities = 176/191 (92%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| |||||||||||||||||||||||||||| | |||| |||||||| |||||||||| Sbjct 10480 GGAAACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCAAGGCAGGCCTATGCTCGAATA 10421 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 10420 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 10362 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 10361 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 10302 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 10301 TTGGATTTATT 10291 >seq1692 Length=29617 Score = 145 bits (160), Expect = 8e-33 Identities = 96/105 (91%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 51 TGCTCGAATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||| Sbjct 2 TGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTT 61 Query 111 CTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAG 155 ||||||||| |||||||||| |||| ||| ||||||||| |||| Sbjct 62 CTAGGACCG-CCGTAATGATTAATAGGGACAGTCGGGGGCATCAG 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511988319200