Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq535 237 1e-57
seq1903 159 3e-34
>seq535
Length=62126
Score = 237 bits (262), Expect = 1e-57
Identities = 579/857 (68%), Gaps = 24/857 (3%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
||||||| |||||||||||||| || || ||||||||||| | || ||| | ||| ||
Sbjct 15647 ATTTGGCAAATGTACAAAAAGGCCGAGGCCTCCTTCTGGACCGCCGAAGAGATTGATCTG 15588
Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGA-GCGGTGAACAACATTTCATTA 61201
||||| || || | |||||| | || | | ||| | | ||| || |||||
Sbjct 15587 TCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGATGACGAGAAGTAC--TTCATCT 15530
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261
|| | |||| ||||||||||| || || || || ||||| ||||| | | || |
Sbjct 15529 CTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAACCTGGTCGAGC 15470
Query 61262 GTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
| ||| || | ||||| || | | ||||| || || |||||||||||||||||
Sbjct 15469 GCTTCA-GCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATG 15411
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAG--C 61378
|||||||| ||||||| |||| ||| | |||||||| || ||||||| |||| |
Sbjct 15410 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACCTACATCAAGGAGAAC 15351
Query 61379 GGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCG-GCGGTGAAGCGGAAA 61437
| | | | || | ||||| ||||| ||||| || || || | || |||
Sbjct 15350 AGCCAGCGCAGCTACC--TCTTCAACGCCATTGAGACCATTCCTTGCATTC--GCAAAAA 15295
Query 61438 G-CGGATTGGGCCTTCAATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGC 61495
| | || |||||| |||| ||||| || | | ||| || | |||| | || ||
Sbjct 15294 GGCCGACTGGGCCATCAAGTGGATTCAGGACAAGAACT-CTTCCTTTGCCCAGCGCCTGG 15236
Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555
| || ||||| | |||||||| | || ||||| || | |||||| | ||||| |||
Sbjct 15235 TTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGG 15176
Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615
| ||||| || || || ||||| ||||||||||| ||| ||| | || || || || |
Sbjct 15175 TCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCAACGAGCTCATCTCTCGTGATG 15116
Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675
|||| |||| ||| ||||| ||| | || | | | || ||| ||| |
Sbjct 15115 AGGGTCTGCACACTGACTTTGCCTGCCTGC--TGCACTCTC-ACCTCAAGAACCGTGCCA 15059
Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735
||||| | |||| || | || || || || || ||||| || |||
Sbjct 15058 GCAAGGAGATGATCCGTGACATCATCACCGACGCTGTCCGAATTGAGCAGGAGTTCTTGA 14999
Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795
| || ||| | ||| | | | | |||||||| | | || ||| |||||| ||||
Sbjct 14998 CCGAGGCTCTCCCCTGCGCCTTGCTTGGCATGAACTCCAGCCTGATGAAGCAGTACATTG 14939
Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAAA 61854
| |||||||||||||| ||| |||||| | | || | ||| || |||| || |
Sbjct 14938 AGTTTGTTGCCGACCGCCTGCTGGTCGCTCTCGGCAACGAAAAGG-TCTACAAGTCTTCC 14880
Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914
||||| ||||| |||||||| | ||||| || | ||||||||| || || ||||||||
Sbjct 14879 AACCCCTTTGACTTCATGGAGAACATTTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAG 14820
Query 61915 CGTGTAGGCGACTATCA 61931
|| || | |||||| ||
Sbjct 14819 CGCGTCGCCGACTACCA 14803
>seq1903
Length=20131
Score = 159 bits (176), Expect = 3e-34
Identities = 428/648 (66%), Gaps = 26/648 (4%)
Strand=Plus/Plus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
|| ||||| | ||| || | |||||| || || | ||| || || || |||||||
Sbjct 4702 GGGAGGGCCAAAGAGGCCAAGTTGCACACGGCAACCTCATCTGGGGCACAGTACTCGATG 4761
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
|| |||||||| || || || ||| ||||| |||| |||| ||| || ||||||||
Sbjct 4762 ATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTTTGGTTGCTCTTGCGG 4821
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
||||| ||||||||| | |||| | || | || ||||| |||| || | ||||
Sbjct 4822 TTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCTTCCAGGATG 4881
Query 66182 GCGTGCCAAAG------AGCGCGT---GCCTTC--ACCGTACGTACCGCCCTACCTTTGC 66230
| | ||| || |||||| | ||| ||| |||| |||| ||||
Sbjct 4882 GAATACCACAGCTTCTGAGCGCGGATGGTCTTGCGACC--ACGT----CCCT-CCTTC-- 4932
Query 66231 GTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACT--TCGGACAGACATGG 66288
||||| | || || | | ||||| | | | ||||| || | || | ||
Sbjct 4933 --TCGTACTTCTCATACAAGGCCTCGAAC--TCCTCGCCATAGCAGTCAGCAAGGCCAGG 4988
Query 66289 ACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAG 66348
||| | || || ||||| |||| ||| || | || || ||||| ||| || ||
Sbjct 4989 ACATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTTCTTCTCAACACGCTTCATGAAGAG 5048
Query 66349 ATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATT 66408
|| || |||||||| || ||| | ||||| || || ||| || ||||||| ||
Sbjct 5049 GTCGGGAATCCAGAGAGCAAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGCCGTGGTT 5108
Query 66409 TTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468
||||| | || ||||||||||||| |||||| ||||| || || ||||||||||| ||
Sbjct 5109 CTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAA 5168
Query 66469 CGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACG 66528
| || ||| ||| ||||| || ||||| || | || |||||||| || ||
Sbjct 5169 AGCACCAGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGTTGAACACTCG 5228
Query 66529 CAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC 66588
| ||| || | | ||||| || | || |||||||| | ||| || || ||
Sbjct 5229 AAGCATGGGAATAATACCGTTGGAGGTACCGTTGGTGCCAGCAATGTAAGAGCCGGTGGC 5288
Query 66589 CCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636
|| || ||| || |||| || |||||||| ||| | || || ||
Sbjct 5289 ACGGATGCGGTGGACGTTCAAGCCGATACCACCAGCCATTTTGGAAAT 5336
Score = 111 bits (122), Expect = 1e-19
Identities = 325/492 (66%), Gaps = 8/492 (2%)
Strand=Plus/Plus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
||| || ||||| || || | | ||| || |||| || | || ||||||||||||||
Sbjct 3795 ATCAACGGTGAATTGAATGGGAGCAGCTGCGGCCTGAGTGCGCAGGTAGTACATGCCGGT 3854
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|||||| ||| ||| || ||| ||||| | || |||| |||| | | | || |
Sbjct 3855 CTTGAGACCAAGCTTCCAGCCAGTGAAGTGCAT-GCTGGTAATCTTGCCCATTGTGGGGT 3913
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || |||| ||||| ||| || ||| || ||||||||| || ||||
Sbjct 3914 CCTTCATGTGGATGTTCAGGGACTGGGACTGGTCAATGAAAGCACCACGATCAGCCGCCA 3973
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | | || | || || |||||||| ||||||||||||| | | | | | ||
Sbjct 3974 TCTGGACAATTTGGCGCTGAGAAATCTCCCACACGGTCTTGTACAAG-GCCTTGATATCT 4032
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
|| || | |||| ||| | || || ||||| || || || |||
Sbjct 4033 TCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCATG 4092
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTT 65432
| || ||||| | || |||| || | |||| ||| | | |||| || |
Sbjct 4093 GCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAG--AAGCCAGGGGTTGACAACCT 4150
Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492
|||||||||||| || ||||| || ||||||||||| ||| ||| || ||| | |
Sbjct 4151 GGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACT 4210
Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552
| ||||||| ||||| |||| ||| ||||| |||||||| ||||| | ||| ||
Sbjct 4211 CGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTGGGCATGGGGGCGACGAGCAAGCTGT 4270
Query 65553 TTCGCAATCCGT 65564
| |||| ||||
Sbjct 4271 TGCGCACACCGT 4282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397556589177200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |