Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08] 2,355 sequences; 38,137,656 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1626 118 4e-21 >seq1626 Length=34239 Score = 118 bits (130), Expect = 4e-21 Identities = 109/138 (79%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 349078 GAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAA 349137 |||||| |||||||||| ||||| || || || |||||||||| | || |||||||| Sbjct 17133 GAGAATTTCCTTGAGTCGGGGCACACCGAGTGTGACGTTCTTGGAAGACACACCGGCAAA 17192 Query 349138 GTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGAT 349197 ||||||||| | || |||| ||||||| |||||| || ||| ||||| | || |||| Sbjct 17193 GTGGAAGGTGTTCAGTGTCATCTGCGTGGCGGGCTCACCAATGGACTGGGCGGCAAGGAC 17252 Query 349198 GCCTACCATCTCGCCGGG 349215 ||| ||||| || ||||| Sbjct 17253 GCCAACCATTTCACCGGG 17270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084674762014290