Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13]
167 sequences; 32,472,817 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq147 693 0.0
seq137 150 7e-34
>seq147
Length=1060137
Score = 693 bits (768), Expect = 0.0
Identities = 560/664 (84%), Gaps = 16/664 (2%)
Strand=Plus/Plus
Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72
||| |||| ||| |||||||||||||||||||||| |||||||||||| |||| |||||
Sbjct 58054 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATG 58113
Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 58114 GGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 58173
Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192
|||||||||||||||||||| ||| |||||| |||||| || ||||||||||||||||||
Sbjct 58174 GATCGAAAGATGAAAAGCACCTTGAAAAGAGGGTTAAATAGTACGTGAAATTGTTGAAAG 58233
Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCAC 251
||||||||||| |||||||||| ||| | | ||| || || ||| |||||||||
Sbjct 58234 GGAAGCGCTTGTGACCAGACTTGGGCGCGGCGGATCATCCGGGGTTCTC-CCCGGTGCAC 58292
Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCG-GGCGGTCGGATAAAGGCCCCGGGAATGTGG 310
| | | | |||||||||||||| ||| |||| ||| |||||| |||||| ||||
Sbjct 58293 TTCGCCGTGTCCAGGCCAGCATCAGTTCGTCGCGG-GGGAAAAAGGCTTCGGGAACGTGG 58351
Query 311 CCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCG 369
| ||| | ||| ||||||||||||| | ||| | || || |||||||||| |||
Sbjct 58352 CTCCC--CTGGGAGTGTTATAGCCCGTTGCATAATAC--CCTGCGGTGGACTGAGGACCG 58407
Query 370 CGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429
||| | || ||||||||||||||||||| |||| ||||||||| ||||||||||||
Sbjct 58408 CGCATCTGCAAGGATGCTGGCGTAATGGTCACCAGCGACCCGTCTTGAAACACGGACCAA 58467
Query 430 GGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAA 488
|||||| | || |||||||||||| ||||||||||||| | |||||||||||||||||
Sbjct 58468 GGAGTC-GTCTTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAA 58526
Query 489 CGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTT 548
|| ||||| || | || ||| ||||||||||||||||||| ||||||||||||
Sbjct 58527 CGCAGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTT 58582
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||||||||||||| | |||||||||||| ||||||||||||||| |||||||||||
Sbjct 58583 GAGTAAGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAG 58642
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 58643 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATA 58702
Query 669 TGGG 672
||||
Sbjct 58703 TGGG 58706
>seq137
Length=1488176
Score = 150 bits (166), Expect = 7e-34
Identities = 180/238 (76%), Gaps = 11/238 (5%)
Strand=Plus/Plus
Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504
|||| ||| | | ||||||||||| | ||||| ||||| ||||||| ||||| | | |
Sbjct 743752 TGCGGGTGCTCGAGTGTCAAACCCCTACGCGTGATGAAGGTGAACGCAGGTGA-ATCGCT 743810
Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564
| || ||| |||| ||||||||| ||| ||| ||| |||||| || ||||||| |
Sbjct 743811 TC--GGCGCATCATCCTCCGATCCTGGTGTTCTCGTATGTATTTGAATAGGAGCATACGT 743868
Query 565 GTTGGGACCCGAAAGATGGTGAACTAT----GCCTGAAT--AGGGT-GAAGCCAGAGGAA 617
| |||||||||||| |||||| || | ||| | || || | || | ||||
Sbjct 743869 GGCCGGACCCGAAAGAAGGTGAATCATTTGCGTATGAGTCGAGAGTCGGAGG-ATAGGAT 743927
Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675
|||||||||||||||||||||||| || ||||| ||||||||||||||| |||| ||
Sbjct 743928 ACTCTGGTGGAGGCTCGCAGCGGTCCTTACGTGCGAATCGATCGTCAAATATGGGCAT 743985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079996417850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |