Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq147 693 0.0 seq137 150 7e-34 >seq147 Length=1060137 Score = 693 bits (768), Expect = 0.0 Identities = 560/664 (84%), Gaps = 16/664 (2%) Strand=Plus/Plus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||| ||||| Sbjct 58054 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATG 58113 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58114 GGAGGTATATGTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 58173 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||| ||| |||||| |||||| || |||||||||||||||||| Sbjct 58174 GATCGAAAGATGAAAAGCACCTTGAAAAGAGGGTTAAATAGTACGTGAAATTGTTGAAAG 58233 Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCAC 251 ||||||||||| |||||||||| ||| | | ||| || || ||| ||||||||| Sbjct 58234 GGAAGCGCTTGTGACCAGACTTGGGCGCGGCGGATCATCCGGGGTTCTC-CCCGGTGCAC 58292 Query 252 TCTTCTGCGGTCAGGCCAGCATCAGCTCG-GGCGGTCGGATAAAGGCCCCGGGAATGTGG 310 | | | | |||||||||||||| ||| |||| ||| |||||| |||||| |||| Sbjct 58293 TTCGCCGTGTCCAGGCCAGCATCAGTTCGTCGCGG-GGGAAAAAGGCTTCGGGAACGTGG 58351 Query 311 CCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCG 369 | ||| | ||| ||||||||||||| | ||| | || || |||||||||| ||| Sbjct 58352 CTCCC--CTGGGAGTGTTATAGCCCGTTGCATAATAC--CCTGCGGTGGACTGAGGACCG 58407 Query 370 CGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429 ||| | || ||||||||||||||||||| |||| ||||||||| |||||||||||| Sbjct 58408 CGCATCTGCAAGGATGCTGGCGTAATGGTCACCAGCGACCCGTCTTGAAACACGGACCAA 58467 Query 430 GGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAA 488 |||||| | || |||||||||||| ||||||||||||| | ||||||||||||||||| Sbjct 58468 GGAGTC-GTCTTCGTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAA 58526 Query 489 CGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTT 548 || ||||| || | || ||| ||||||||||||||||||| |||||||||||| Sbjct 58527 CGCAGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTT 58582 Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||| Sbjct 58583 GAGTAAGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTGAAG 58642 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 58643 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATA 58702 Query 669 TGGG 672 |||| Sbjct 58703 TGGG 58706 >seq137 Length=1488176 Score = 150 bits (166), Expect = 7e-34 Identities = 180/238 (76%), Gaps = 11/238 (5%) Strand=Plus/Plus Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504 |||| ||| | | ||||||||||| | ||||| ||||| ||||||| ||||| | | | Sbjct 743752 TGCGGGTGCTCGAGTGTCAAACCCCTACGCGTGATGAAGGTGAACGCAGGTGA-ATCGCT 743810 Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 | || ||| |||| ||||||||| ||| ||| ||| |||||| || ||||||| | Sbjct 743811 TC--GGCGCATCATCCTCCGATCCTGGTGTTCTCGTATGTATTTGAATAGGAGCATACGT 743868 Query 565 GTTGGGACCCGAAAGATGGTGAACTAT----GCCTGAAT--AGGGT-GAAGCCAGAGGAA 617 | |||||||||||| |||||| || | ||| | || || | || | |||| Sbjct 743869 GGCCGGACCCGAAAGAAGGTGAATCATTTGCGTATGAGTCGAGAGTCGGAGG-ATAGGAT 743927 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 |||||||||||||||||||||||| || ||||| ||||||||||||||| |||| || Sbjct 743928 ACTCTGGTGGAGGCTCGCAGCGGTCCTTACGTGCGAATCGATCGTCAAATATGGGCAT 743985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079996417850