Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq167 129 1e-27 >seq167 Length=38993 Score = 129 bits (142), Expect = 1e-27 Identities = 196/275 (71%), Gaps = 8/275 (3%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||| |||| |||||| ||| ||||||||||||||| | |||||||| |||| Sbjct 24056 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 23997 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| | Sbjct 23996 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 23937 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC----TTCGCGTTAGCTAAC 186 | |||| ||||||| || ||||||| ||| || | | | | || || Sbjct 23936 CA-CGTTAAGGCCGCCTTTAACCGGGGTTTCCGTCTACATCAAATATTAATATATTCAAT 23878 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCGTG 245 ||| |||||| |||||||||||||| |||||| ||||| | | ||| | Sbjct 23877 TATATCTGTTAACCAGCCGGCACCGGGCAGATATCACACTTTATACTTAGATTTTTAATC 23818 Query 246 TTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 ||| ||| ||||||||||||| | |||||||||| Sbjct 23817 TTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 23783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260797894464