Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq167 93.3 1e-16 >seq167 Length=38993 Score = 93.3 bits (102), Expect = 1e-16 Identities = 140/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| | Sbjct 17272 GGGGACAAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATGC 17331 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413 | |||||| | |||||| | || | |||| |||| || ||| | | | | || Sbjct 17332 CTGGACAAAGAGATGCGAAAATGTGAATTTAAGCTAATCTCAAAAAACAGGATATAAATT 17391 Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||||||||||| || ||||||||||||| | ||| ||||||||||| ||| Sbjct 17392 TTAAGGATTGTAGTCTGAAATTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATC 17451 Query 471 AGCATGCTACGGTGAAT 487 | |||| ||||||||| Sbjct 17452 ACCATGTCACGGTGAAT 17468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503997488320