Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13]
167 sequences; 32,472,817 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq147 488 9e-136
>seq147
Length=1060137
Score = 488 bits (540), Expect = 9e-136
Identities = 286/295 (97%), Gaps = 1/295 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| ||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct 60902 TACTAAGCTCAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60844
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60843 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 60784
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 60783 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 60724
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60723 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 60664
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60663 CAAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 60609
Score = 241 bits (266), Expect = 2e-61
Identities = 191/230 (83%), Gaps = 26/230 (11%)
Strand=Plus/Plus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA----TGATAGGAAGAG 146
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 16574 TTAGTGGGTGAACAATCTAACGCTTACCGAATTCTGCTTCGGTAGGTATGATAGGAAGAG 16633
Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTA--------TGAACGCTTGGCTGCCACA 198
||||||||||||||| ||||||| ||||||||| ||| |||||||| ||||||
Sbjct 16634 CCGACATCGAAGGATTAAAAAGCGACGTCGCTACCTAAGTATGAGCGCTTGGCCGCCACA 16693
Query 199 AGCCA--------GT-TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
||| | || ||| ||||||||||||||||||||||||| |||||| ||| |||
Sbjct 16694 AGCTACCTTAGTTGTCTATTCCTGTGGTAACTTTTCTGGCACCTCGAGCCTCGAATGTCG 16753
Query 250 AGGGACTAAAGGATCGATAGGCC-----ACACTTTCATGGTTTGTATTCA 294
| ||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 16754 AAGGACTAAAGGATCGATAGGCCACACGACACTTTCATGGACTGTATTCA 16803
Score = 122 bits (134), Expect = 1e-25
Identities = 83/92 (90%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||| ||| ||| ||||||| || || ||||||||||||||||||||||||||||||||
Sbjct 16011 TACTGAGCTCAATGACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 16069
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
||||||||||||||||||||| |||||||||
Sbjct 16070 CGACGGTCTAAACCCAGCTCACATTCCCTATT 16101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854398573152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |