Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq147 464 1e-128 >seq147 Length=1060137 Score = 464 bits (514), Expect = 1e-128 Identities = 290/309 (94%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | |||||||||||||| Sbjct 56726 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCCGGCTTCTTAG 56785 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56786 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 56845 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||||||||||||||||||||||||||||| ||||| | || ||||||||| Sbjct 56846 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTAC-TC-CCTTGGCCG 56903 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56904 GAAGGCCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 56963 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 56964 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 57023 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 57024 CCCTTTGTA 57032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198418176