Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq123 107 8e-18 seq135 100 1e-15 >seq123 Length=145489 Score = 107 bits (118), Expect = 8e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 349096 GGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGT 349155 ||| || ||||| |||||||||||||||| | |||||| ||||||||||| | ||| || Sbjct 46535 GGGGATACCCAGCGTCACGTTCTTGGCCGAGTGGCCGGCCAAGTGGAAGGTGTTGAGCGT 46476 Query 349156 CAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGG 349215 || |||||| |||||||| | | ||||||| |||| |||||| || ||| ||||| Sbjct 46475 CATCTGCGTCGACGGCTCGCCCACGGACTGGCCGGCGACGATGCCCACGGCCTCTCCGGG 46416 Query 349216 CGCG 349219 | || Sbjct 46415 CTCG 46412 >seq135 Length=1177387 Score = 100 bits (110), Expect = 1e-15 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 349078 GAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAA 349137 ||| || |||||||| | ||||| || || || |||||||||| | || || ||||| Sbjct 769589 GAGGATTTCCTTGAGACGGGGCACACCGAGCGTGACGTTCTTGGAGGACACACCAGCAAA 769648 Query 349138 GTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGAT 349197 ||||||||| | || |||| |||||| ||||| |||||| |||| ||||||||| Sbjct 769649 GTGGAAGGTGTTCAGAGTCATCTGCGTAGCAGGCTCACCGATGGACTGAGCCGCGAGGAC 769708 Query 349198 GCCTACCATCTCGCCGGG 349215 || ||||| || ||||| Sbjct 769709 ACCCACCATTTCACCGGG 769726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084734630512266