Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq135 100 1e-15 >seq135 Length=1177387 Score = 100 bits (110), Expect = 1e-15 Identities = 110/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 364427 ATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCA 364486 || ||||||||||| ||||||| | | ||||||||||||||||| ||| || || || Sbjct 452909 ATTGTCATACGAGACGGAATGGCGTGGGGGTTGATGATGATGTCGGGCGTGATTCCCTCT 452850 Query 364487 GCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATA 364545 ||| || ||||| | || | | || | | ||| |||||| || |||||||| | | Sbjct 452849 CTGGTGAACGGCATGTCCTCCTGCCGGTAAG-TGACACCAATAGTGCCCTTTTGTCCGTG 452791 Query 364546 GCGAGAAGCAAACTTGTCGCCAAT 364569 ||||||||||||||||| ||||| Sbjct 452790 ACGAGAAGCAAACTTGTCACCAAT 452767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884882366932131