Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20virens_20[genbank_20GCA_5F001835465.1_202016-10-24]
107 sequences; 45,820,083 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq68 161 4e-37
>seq68
Length=209871
Score = 161 bits (178), Expect = 4e-37
Identities = 148/184 (80%), Gaps = 6/184 (3%)
Strand=Plus/Plus
Query 367 CCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGAC 426
|||||| | || ||||||||||| ||||||| |||| |||||||| || ||||||
Sbjct 63928 CCGCGCATCTGCAAGGATGCTGGCATAATGGTCACCAGCGACCCGTCTTAAAAAACGGAC 63987
Query 427 CAAGGAGTCTAACATC-TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGT 485
||||||||| | || |||||||||||||||||||||||||| |||||||||||||||
Sbjct 63988 CAAGGAGTC-GTCTTCGTATGCGAGTGTTTGGGTGTCAAACCCCTGCGCGTAATGAAAGC 64046
Query 486 GAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGA 545
||||| || ||||| | || ||| |||||| |||||||||||| ||||||||
Sbjct 64047 GAACGCAGATGGGA----GCTTTGGCGCATCATCGATCGATCCTGATGTTCTCGGATGGG 64102
Query 546 TTTG 549
||||
Sbjct 64103 TTTG 64106
Score = 113 bits (124), Expect = 2e-22
Identities = 82/95 (86%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637
||| ||||||||||||||| ||||||||||||||||||||| ||| ||||| ||| |
Sbjct 23645 AGAAGGTGAACTATGCCTGTGTAGGGTGAAGCCAGAGGAAACCCTGCTGGAGAACCGCTG 23704
Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672
|| |||||||||||||||||| ||||||| ||||
Sbjct 23705 TGGCTCTGGCGTGCAAATCGATGGTCAAATATGGG 23739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079997704850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |