Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001835465.1_202016-10-24] 107 sequences; 45,820,083 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq105 161 2e-37 >seq105 Length=160586 Score = 161 bits (178), Expect = 2e-37 Identities = 133/161 (83%), Gaps = 7/161 (4%) Strand=Plus/Plus Query 20 TGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCA--- 76 || ||||| |||||||| |||| ||||||||||| |||| | |||| ||| || ||| Sbjct 140813 TGCGGCGA-GGTCATCAATAGGTTAAAACTAACCCGTCTTACGACGATCTTAAACCACAG 140871 Query 77 ---GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGT 133 ||| ||||| |||||||||||||| | |||| | |||||||||||||| ||||| || Sbjct 140872 GTAGCTTACGTTGCCTATTAGTGGGTGGAAAATCTATCGCTTACCGAATTCCGCTTCAGT 140931 Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGT 174 || ||||||||||| | ||||||||||||||||||||| || Sbjct 140932 ATAATAGGAAGAGCTGGCATCGAAGGATCAAAAAGCAATGT 140972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399085792