Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001835465.1_202016-10-24] 107 sequences; 45,820,083 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq41 91.5 6e-13 >seq41 Length=363786 Score = 91.5 bits (100), Expect = 6e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 349078 GAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAA 349137 |||||| |||||||||| |||| || || || |||||||||| | || || ||||| Sbjct 178273 GAGAATTTCCTTGAGTCGAGGCACACCGAGCGTGACGTTCTTGGAAGACACACCAGCAAA 178214 Query 349138 GTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGAT 349197 ||||||||| | || |||| ||| ||| |||||| || || |||| | || |||| Sbjct 178213 GTGGAAGGTGTTCAGTGTCATCTGGGTGGCGGGCTCACCAATAGACTGAGCAGCAAGGAC 178154 Query 349198 GCCTACCATCTCGCCGGG 349215 ||| ||||| || || || Sbjct 178153 GCCAACCATTTCACCAGG 178136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084736272244386