Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04]
197 sequences; 42,030,438 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq44 84.2 7e-14
>seq44
Length=3636
Score = 84.2 bits (92), Expect = 7e-14
Identities = 138/197 (70%), Gaps = 4/197 (2%)
Strand=Plus/Plus
Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354
|||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| |
Sbjct 1217 GGGGACAAAGACAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATACGC 1276
Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413
| |||||| | || ||| | || | |||| |||| || ||| | | | | ||
Sbjct 1277 CTGGACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCAAAAAACAGGATATAAATT 1336
Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470
||||| ||||||| || ||||||||||||| | ||| ||||||||||| |||
Sbjct 1337 TTAAGGATTATAGTCTGAAATTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATC 1396
Query 471 AGCATGCTACGGTGAAT 487
| |||| |||||||||
Sbjct 1397 ACCATGTCACGGTGAAT 1413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503997037120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |