Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq44 84.2 7e-14 >seq44 Length=3636 Score = 84.2 bits (92), Expect = 7e-14 Identities = 138/197 (70%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 |||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| | Sbjct 1217 GGGGACAAAGACAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATACGC 1276 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413 | |||||| | || ||| | || | |||| |||| || ||| | | | | || Sbjct 1277 CTGGACAAAGAGATGCAAAAATGTGAATTTAAGCTAATCTCAAAAAACAGGATATAAATT 1336 Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||| ||||||| || ||||||||||||| | ||| ||||||||||| ||| Sbjct 1337 TTAAGGATTATAGTCTGAAATTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATC 1396 Query 471 AGCATGCTACGGTGAAT 487 | |||| ||||||||| Sbjct 1397 ACCATGTCACGGTGAAT 1413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503997037120