Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq185 212 1e-52 >seq185 Length=1472973 Score = 212 bits (234), Expect = 1e-52 Identities = 167/196 (85%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 27 CGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATT 86 |||||||| || ||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 1418677 CGCGTGCGACCTAGAGTATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCCATC 1418618 Query 87 GGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATG-GGGCTAT 145 ||| || ||| || ||||||||||||||| || | ||| || | || ||||||| Sbjct 1418617 AGCTTGA-GCCGATGCTCCCTCTAAGAAGCCGGCGTACTGCCAAAG-CAATACGGGCTAT 1418560 Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||| |||||||||||| ||||||||||| |||||| |||||||||||||||||||| || Sbjct 1418559 TTAGTAGGTTAAGGTCTTGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAAGTA 1418500 Query 206 AGAACGGCCATGCACC 221 ||||||||||||| || Sbjct 1418499 AGAACGGCCATGCGCC 1418484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798479357