Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04]
197 sequences; 42,030,438 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq185 212 1e-52
>seq185
Length=1472973
Score = 212 bits (234), Expect = 1e-52
Identities = 167/196 (85%), Gaps = 3/196 (2%)
Strand=Plus/Minus
Query 27 CGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATT 86
|||||||| || ||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1418677 CGCGTGCGACCTAGAGTATCTAAGGGCATCACAGACCTGTTATTGCCTTAAACTTCCATC 1418618
Query 87 GGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATG-GGGCTAT 145
||| || ||| || ||||||||||||||| || | ||| || | || |||||||
Sbjct 1418617 AGCTTGA-GCCGATGCTCCCTCTAAGAAGCCGGCGTACTGCCAAAG-CAATACGGGCTAT 1418560
Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205
|||| |||||||||||| ||||||||||| |||||| |||||||||||||||||||| ||
Sbjct 1418559 TTAGTAGGTTAAGGTCTTGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAAGTA 1418500
Query 206 AGAACGGCCATGCACC 221
||||||||||||| ||
Sbjct 1418499 AGAACGGCCATGCGCC 1418484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796798479357
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |