Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04]
197 sequences; 42,030,438 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq139 293 4e-77
seq50 104 4e-20
>seq139
Length=270994
Score = 293 bits (324), Expect = 4e-77
Identities = 191/210 (91%), Gaps = 5/210 (2%)
Strand=Plus/Minus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 135755 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 135696
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||||||||||| | |||||||| |||||||||| ||||||||||||||||||
Sbjct 135695 CATCGAAGGATCAAAAAGCGATGTCGCTATCAACGCTTGGCCGCCACAAGCCAGTTATCC 135636
Query 211 CTGTGGT-----AACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265
||||||| | || ||||||||||||||||| ||| ||||| |||||||||||||
Sbjct 135635 CTGTGGTGGTTGGAGCTTCCTGGCACCTCTAGCCTCCAATGTCGAGAGACTAAAGGATCG 135576
Query 266 ATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||| ||| ||||||||||||||||
Sbjct 135575 ATAGGCCATACTCACATGGTTTGTATTCAC 135546
Score = 131 bits (144), Expect = 3e-28
Identities = 83/89 (93%), Gaps = 1/89 (1%)
Strand=Plus/Minus
Query 4 TAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGA 63
||||| ||||||||||| || || |||||||||||||||||||||||||||||||| ||
Sbjct 136325 TAAGCTCAATTACCATTGCGGGGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCACGA 136267
Query 64 CGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||
Sbjct 136266 CGGTCTAAACCCAGCTCACGTTCCCTATT 136238
>seq50
Length=513
Score = 104 bits (114), Expect = 4e-20
Identities = 59/60 (98%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 236 AGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGCCTCAAATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 60
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854398316832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |