Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq124 161 1e-37 seq126 156 5e-36 >seq124 Length=417 Score = 161 bits (178), Expect = 1e-37 Identities = 157/194 (81%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 209 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 268 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG-C 124 || || |||||| |||| |||||||||||| |||| ||||||||||| ||||| ||| | Sbjct 269 AGCATAGGCCTGCCTTGAGCACTCTAATTTTTTCAAAGTAAAAGTCCT-GTTCCCCCGCC 327 Query 125 ACA-CCAATGAA-GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCG 181 ||| ||| |||| ||||| ||| || || || | ||| | || |||| | || Sbjct 328 ACACCCAGTGAAGGGCAT-GGGGTTCCGCAGAGGGAAAGGCCCGGCCGGACCAGTGCACG 386 Query 182 CCGTGAGGCGGACC 195 | |||||||||||| Sbjct 387 CGGTGAGGCGGACC 400 >seq126 Length=318 Score = 156 bits (172), Expect = 5e-36 Identities = 115/133 (86%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 145 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 204 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||| |||| |||||||||||| |||| ||||||| |||| |||| | || Sbjct 205 AGCATAGGCCTGCCTTGAGCACTCTAATTTTTTCAAAGTAAAAGCCCTGTTTCCCCGCCA 264 Query 126 CA-CCAATGAAGG 137 || ||| |||||| Sbjct 265 CACCCAGTGAAGG 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595198864098