Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04]
197 sequences; 42,030,438 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq124 161 1e-37
seq126 156 5e-36
>seq124
Length=417
Score = 161 bits (178), Expect = 1e-37
Identities = 157/194 (81%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 209 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 268
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG-C 124
|| || |||||| |||| |||||||||||| |||| ||||||||||| ||||| ||| |
Sbjct 269 AGCATAGGCCTGCCTTGAGCACTCTAATTTTTTCAAAGTAAAAGTCCT-GTTCCCCCGCC 327
Query 125 ACA-CCAATGAA-GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCG 181
||| ||| |||| ||||| ||| || || || | ||| | || |||| | ||
Sbjct 328 ACACCCAGTGAAGGGCAT-GGGGTTCCGCAGAGGGAAAGGCCCGGCCGGACCAGTGCACG 386
Query 182 CCGTGAGGCGGACC 195
| ||||||||||||
Sbjct 387 CGGTGAGGCGGACC 400
>seq126
Length=318
Score = 156 bits (172), Expect = 5e-36
Identities = 115/133 (86%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 145 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 204
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| |||| |||||||||||| |||| ||||||| |||| |||| | ||
Sbjct 205 AGCATAGGCCTGCCTTGAGCACTCTAATTTTTTCAAAGTAAAAGCCCTGTTTCCCCGCCA 264
Query 126 CA-CCAATGAAGG 137
|| ||| ||||||
Sbjct 265 CACCCAGTGAAGG 277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595198864098
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |