Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq21 109 2e-18 >seq21 Length=197681 Score = 109 bits (120), Expect = 2e-18 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 349078 GAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAA 349137 |||||| |||||||||| |||| || || || |||||||||| | || |||||||| Sbjct 47275 GAGAATTTCCTTGAGTCGAGGCACACCGAGTGTGACGTTCTTGGAAGACACACCGGCAAA 47216 Query 349138 GTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGAT 349197 ||||||||| | || |||| ||||||| |||||| || ||| ||||| | || |||| Sbjct 47215 GTGGAAGGTGTTCAGCGTCATCTGCGTGGCGGGCTCACCAATGGACTGGGCAGCAAGGAC 47156 Query 349198 GCCTACCATCTCGCCGGG 349215 || ||||| || ||||| Sbjct 47155 ACCAACCATTTCACCGGG 47138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084733809646206