Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq934 141 2e-31
>seq934
Length=478
Score = 141 bits (156), Expect = 2e-31
Identities = 226/319 (71%), Gaps = 9/319 (3%)
Strand=Plus/Minus
Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60
|| |||| | ||||| |||||| || |||||| ||| ||| | ||||| ||| |||||
Sbjct 387 TACCCCGGG-AGGGGAGTGAAAGAGTTCCTGAAACCGGTCGCATGCAAGCCGTCAGAGCC 329
Query 61 GAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGC 120
||| ||||| ||||||||||||| | ||||||||| ||||||||| | ||
Sbjct 328 T-GTGT---GGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGATGCGTGGC 273
Query 121 GAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAG 180
|||||||| | || | || || || ||||||||| | | |||||| |||
Sbjct 272 GAGGTTAA---CCCGTGGTGGGGGAGTCGTAGCGAAAGCGAGTCCGATAAGGGCG-TGAG 217
Query 181 TTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAA 240
| | | |||||| |||| | ||||||||| ||| | |||| ||||| ||||||
Sbjct 216 TCGCGTGTTCTAGACCCGAAGCGGTGTGATCTATCCATGGCCAGGATGAAGCGTCGGTAA 157
Query 241 CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGG 300
||| |||||| ||||||| |||||||| |||||| | | || ||||
Sbjct 156 GACGTCGTGGAGGTCCGAACCCACTTCAGTTGAAAATGGAGGGGATGAGTTGTGGATAGG 97
Query 301 GGTGAAAGGCCAATCAAAC 319
|||||||||||||||||||
Sbjct 96 GGTGAAAGGCCAATCAAAC 78
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972768043520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |