Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq934 141 2e-31 >seq934 Length=478 Score = 141 bits (156), Expect = 2e-31 Identities = 226/319 (71%), Gaps = 9/319 (3%) Strand=Plus/Minus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| |||||| || |||||| ||| ||| | ||||| ||| ||||| Sbjct 387 TACCCCGGG-AGGGGAGTGAAAGAGTTCCTGAAACCGGTCGCATGCAAGCCGTCAGAGCC 329 Query 61 GAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGC 120 ||| ||||| ||||||||||||| | ||||||||| ||||||||| | || Sbjct 328 T-GTGT---GGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGATGCGTGGC 273 Query 121 GAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAG 180 |||||||| | || | || || || ||||||||| | | |||||| ||| Sbjct 272 GAGGTTAA---CCCGTGGTGGGGGAGTCGTAGCGAAAGCGAGTCCGATAAGGGCG-TGAG 217 Query 181 TTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAA 240 | | | |||||| |||| | ||||||||| ||| | |||| ||||| |||||| Sbjct 216 TCGCGTGTTCTAGACCCGAAGCGGTGTGATCTATCCATGGCCAGGATGAAGCGTCGGTAA 157 Query 241 CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGG 300 ||| |||||| ||||||| |||||||| |||||| | | || |||| Sbjct 156 GACGTCGTGGAGGTCCGAACCCACTTCAGTTGAAAATGGAGGGGATGAGTTGTGGATAGG 97 Query 301 GGTGAAAGGCCAATCAAAC 319 ||||||||||||||||||| Sbjct 96 GGTGAAAGGCCAATCAAAC 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972768043520