Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1961 253 3e-65 >seq1961 Length=8045 Score = 253 bits (280), Expect = 3e-65 Identities = 196/229 (86%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || | | |||| ||||||| | || ||||||| ||| | Sbjct 3790 GTACAAAGGGCAGGGACGTAATCGGCACAAGCT-GATGACTTGTGCCTACTAGGCATT-C 3733 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| ||| | |||||| Sbjct 3732 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGGGTTTAACAAGATT 3673 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||||||||||||| |||||| || ||||||||||||||||||| Sbjct 3672 ACCCAGGCCTCTCGGCCAAGGTGATGGACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCG 3613 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3612 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 3564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751976068775