Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1961 161 6e-38 >seq1961 Length=8045 Score = 161 bits (178), Expect = 6e-38 Identities = 108/118 (92%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA-AAATGATAACATCGCC 59 ||||||||| ||||||||||||||||||||||||| || |||| ||| || ||| || | Sbjct 3262 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATAAAAGA-AACCCCGTC 3204 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3203 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278391426150