Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1961 450 3e-124 >seq1961 Length=8045 Score = 450 bits (498), Expect = 3e-124 Identities = 289/314 (92%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| ||| ||||||| ||||||| || |||| |||||||||| ||| | ||| Sbjct 2832 TGGTCCGGCTGGGTCTTTCCTCCTGGGGAACCCCATGGCCTTCACTGGCCGTGG-GCGGA 2890 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2891 ACCAGGGCTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATACAT 2950 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2951 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 3010 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 3011 AATGATTAATAGGGATAGTCGGGGGCGTCAGTATTCGGCTGTCAGAGGTGAAATTCTTGG 3070 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 3071 ATTTGCCGAAGACTAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGTGA 3130 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 3131 ACGAAAGTTAGGGG 3144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915169935680