Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1961 810 0.0
>seq1961
Length=8045
Score = 810 bits (898), Expect = 0.0
Identities = 581/664 (88%), Gaps = 6/664 (1%)
Strand=Plus/Plus
Query 22 GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAA 81
|||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 4803 GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGCGGGTGGTAAA 4862
Query 82 TTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 141
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 4863 TTTCATCTAAAGCTAAATATTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 4922
Query 142 ATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCT 201
| |||||||| ||| |||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 4923 GTTAAAAGCACCTTGAAAAGGGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCT 4982
Query 202 TGCAACCAGACTTGCCCGCAGTTGCTCAACCG--GCCCCTCGGCCGGTGCACTCTTCTGC 259
||| ||||||| | || | | ||| | | || | || ||| ||| | || || |
Sbjct 4983 TGCGGCCAGACTCGGGGGC-GGGGTTCAGCGGGTGCTCGTC-GCCCGTGTATTCCTCGTC 5040
Query 260 GGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319
| |||||||||||| | | ||| ||| ||||||||| |||||||| | | |||
Sbjct 5041 TCCCGGGCCAGCATCAGTTTCGACGGCCGGTCAAAGGCCCCCGGAATGTGTCGTCTCTCG 5100
Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCT 379
|| || |||||||| |||||| ||||||||| | | ||||||||| ||||||||||||
Sbjct 5101 GGACGTCTTATAGCCGGGGGTGCAATGCGGCCTGTCGGGACTGAGGAACGCGCTCCGGCT 5160
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 5161 CGGATGCTGGCGTAATGGCCGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 5220
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
||| | ||||||||| |||||||||||||||||||| | |||||| ||||||||||||||
Sbjct 5221 ATCCACGCGAGTGTTCGGGTGTCAAACCCGTGCGCGCAGTGAAAGCGAACGGAGGTGGGA 5280
Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
|| | |||| |||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 5281 GCC--TTAGGGCGCACCATCGACCGATCCTGAAGTCTTCGGATGGATTTGAGTAGGAGCG 5338
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5339 TGGCCGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 5398
Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 5399 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGCATAGGG 5458
Query 680 GCGA 683
||||
Sbjct 5459 GCGA 5462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079929536750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |