Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1961 810 0.0 >seq1961 Length=8045 Score = 810 bits (898), Expect = 0.0 Identities = 581/664 (88%), Gaps = 6/664 (1%) Strand=Plus/Plus Query 22 GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAA 81 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 4803 GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGCGGGTGGTAAA 4862 Query 82 TTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 141 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4863 TTTCATCTAAAGCTAAATATTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 4922 Query 142 ATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCT 201 | |||||||| ||| |||| |||||||| |||||||||||||||||||||||||||||| Sbjct 4923 GTTAAAAGCACCTTGAAAAGGGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCGCT 4982 Query 202 TGCAACCAGACTTGCCCGCAGTTGCTCAACCG--GCCCCTCGGCCGGTGCACTCTTCTGC 259 ||| ||||||| | || | | ||| | | || | || ||| ||| | || || | Sbjct 4983 TGCGGCCAGACTCGGGGGC-GGGGTTCAGCGGGTGCTCGTC-GCCCGTGTATTCCTCGTC 5040 Query 260 GGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319 | |||||||||||| | | ||| ||| ||||||||| |||||||| | | ||| Sbjct 5041 TCCCGGGCCAGCATCAGTTTCGACGGCCGGTCAAAGGCCCCCGGAATGTGTCGTCTCTCG 5100 Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCT 379 || || |||||||| |||||| ||||||||| | | ||||||||| |||||||||||| Sbjct 5101 GGACGTCTTATAGCCGGGGGTGCAATGCGGCCTGTCGGGACTGAGGAACGCGCTCCGGCT 5160 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 5161 CGGATGCTGGCGTAATGGCCGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 5220 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 ||| | ||||||||| |||||||||||||||||||| | |||||| |||||||||||||| Sbjct 5221 ATCCACGCGAGTGTTCGGGTGTCAAACCCGTGCGCGCAGTGAAAGCGAACGGAGGTGGGA 5280 Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 || | |||| |||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct 5281 GCC--TTAGGGCGCACCATCGACCGATCCTGAAGTCTTCGGATGGATTTGAGTAGGAGCG 5338 Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5339 TGGCCGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 5398 Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679 |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 5399 TCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGCATAGGG 5458 Query 680 GCGA 683 |||| Sbjct 5459 GCGA 5462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079929536750