Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq953 138 3e-30 seq2205 120 8e-25 >seq953 Length=207 Score = 138 bits (152), Expect = 3e-30 Identities = 106/126 (84%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||| || | | ||||||| | |||||| ||| ||||||| | ||||| Sbjct 82 GCATCTTTACTCGTAATGCAATTTCGCCGAGTCTGTGGTTGAGACAGTAGAGAAGTCGTT 141 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 142 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 201 Query 133 TTGTTA 138 | |||| Sbjct 202 TAGTTA 207 >seq2205 Length=24276 Score = 120 bits (132), Expect = 8e-25 Identities = 189/268 (71%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||| ||| || | ||||||||||||||| | | |||||||| |||||| Sbjct 8681 GCATCTGCACTGCTAATTCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGTATCGTT 8622 Query 73 ACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 | | ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||||| || Sbjct 8621 AAGTCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 8562 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TCGCGTTAGCTAACCCCA 190 || | || ||||||| || | ||||| | ||||| | || || ||| | Sbjct 8561 ATAGATAAGGCCGCCATTAATCGGGGTGTTCATCAAAACCTAATTAAATAATTAAGTAAA 8502 Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250 || ||| ||| ||| || ||||||| | |||||| | |||| | | || | || || Sbjct 8501 TCTGTTACCCTACCGACATCGGGCAGACATCACACTCAATACTTAGATTTCTATCTTGGC 8442 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCG 278 |||||||| |||||| | |||||||||| Sbjct 8441 AGAGTGCTTTGTTTTAATTAAACAGTCG 8414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260758582720