Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq953 138 3e-30
seq2205 120 8e-25
>seq953
Length=207
Score = 138 bits (152), Expect = 3e-30
Identities = 106/126 (84%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
||||||| || | | ||||||| | |||||| ||| ||||||| | |||||
Sbjct 82 GCATCTTTACTCGTAATGCAATTTCGCCGAGTCTGTGGTTGAGACAGTAGAGAAGTCGTT 141
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 142 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 201
Query 133 TTGTTA 138
| ||||
Sbjct 202 TAGTTA 207
>seq2205
Length=24276
Score = 120 bits (132), Expect = 8e-25
Identities = 189/268 (71%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||| ||| || | ||||||||||||||| | | |||||||| ||||||
Sbjct 8681 GCATCTGCACTGCTAATTCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGTATCGTT 8622
Query 73 ACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131
| | ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||||| ||
Sbjct 8621 AAGTCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 8562
Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TCGCGTTAGCTAACCCCA 190
|| | || ||||||| || | ||||| | ||||| | || || ||| |
Sbjct 8561 ATAGATAAGGCCGCCATTAATCGGGGTGTTCATCAAAACCTAATTAAATAATTAAGTAAA 8502
Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250
|| ||| ||| ||| || ||||||| | |||||| | |||| | | || | || ||
Sbjct 8501 TCTGTTACCCTACCGACATCGGGCAGACATCACACTCAATACTTAGATTTCTATCTTGGC 8442
Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCG 278
|||||||| |||||| | ||||||||||
Sbjct 8441 AGAGTGCTTTGTTTTAATTAAACAGTCG 8414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260758582720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |