Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq641 210 7e-52
seq486 201 3e-49
seq2205 84.2 7e-14
>seq641
Length=230
Score = 210 bits (232), Expect = 7e-52
Identities = 125/131 (95%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| ||||||| |||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 99 TACGGCCGCAAGCCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGCGGAGCAT 158
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 159 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 218
Query 121 TAGAGATAGAG 131
|||||||||||
Sbjct 219 TAGAGATAGAG 229
>seq486
Length=262
Score = 201 bits (222), Expect = 3e-49
Identities = 194/248 (78%), Gaps = 1/248 (0%)
Strand=Plus/Minus
Query 250 GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAA 309
|||||| |||| | ||| ||||| | ||| |||||||||||||||| ||||||||
Sbjct 262 GTTGGGGACTCAGTGGAGACCGCCGGGGTCAACTCGGAGGAAGGTGGGGATGACGTCAAG 203
Query 310 TCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAG 369
||||||||||||||||| ||||| ||| | ||||||||||| |||| || | |
Sbjct 202 TCATCATGCCCCTTATGTCCAGGGCTTCACGCATGCTACAATGGCTGGTACAGAGAGTGG 143
Query 370 CGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCA 429
||| | | |||| ||| |||| | |||| | ||||||||||||||| |||||||
Sbjct 142 CGAGCCTGTGAGGGTGAGCGAATCTCGGAAAGCCGGTCTCAGTTCGGATTGGGGTCTGCA 83
Query 430 ACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGGTGAATA 488
||||||| |||||| ||| ||||||||||||| |||||||| | ||| |||||||||
Sbjct 82 ACTCGACCTCATGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCAACGCTGCGGTGAATA 23
Query 489 CGTTCCCG 496
||||||||
Sbjct 22 CGTTCCCG 15
>seq2205
Length=24276
Score = 84.2 bits (92), Expect = 7e-14
Identities = 133/187 (71%), Gaps = 4/187 (2%)
Strand=Plus/Plus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| || || | ||||||| | |||||| ||| | || |||||| |
Sbjct 4134 CAAGTCATCATGGCCAAAATATTGTGGGCTATAGACGTGCCACATTTTTCATTACAAAAG 4193
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425
| | | | | || |||| ||||| |||| ||| | | | |||||||||||
Sbjct 4194 GATGTTATATTGTGAAAATAAGCTAATCCT-TAAATTTGATT--AATATGGATTGTAGTC 4250
Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485
|| |||||||||| ||||| ||||| ||||||||||| |||| || | |||||||
Sbjct 4251 TGTAACTCGACTACATGAATAAGGAATTACTAGTAATCGTTAATCATCACGTAACGGTGA 4310
Query 486 ATACGTT 492
|| ||||
Sbjct 4311 AT-CGTT 4316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503950593600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |