Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1961 338 1e-90
>seq1961
Length=8045
Score = 338 bits (374), Expect = 1e-90
Identities = 230/257 (89%), Gaps = 1/257 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3645 ACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3586
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| | || || | | ||||||||||||||||||||||
Sbjct 3585 CCTGTTATTGCCTCAAACTTCCATCGACTTGA-GTCGATAGTCCCTCTAAGAAGCCAGCG 3527
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|| | | ||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3526 GCCGGCAGACGCCGACCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 3467
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct 3466 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGAA 3407
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 3406 AGAGCTCTCAATCTGTC 3390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796774643085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |