Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1961 338 1e-90 >seq1961 Length=8045 Score = 338 bits (374), Expect = 1e-90 Identities = 230/257 (89%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3645 ACTCGCTGGCCCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3586 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| | || || | | |||||||||||||||||||||| Sbjct 3585 CCTGTTATTGCCTCAAACTTCCATCGACTTGA-GTCGATAGTCCCTCTAAGAAGCCAGCG 3527 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 || | | ||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 3526 GCCGGCAGACGCCGACCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 3467 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct 3466 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCATCCAAAAGATCAAGAA 3407 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 3406 AGAGCTCTCAATCTGTC 3390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796774643085