Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq934 509 6e-142 >seq934 Length=478 Score = 509 bits (564), Expect = 6e-142 Identities = 409/491 (83%), Gaps = 18/491 (4%) Strand=Plus/Plus Query 102 ATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGA 161 |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct 1 ATCCAGTGCTCTACCTCCAACAAGAACCACGCAACGCTGCACCTAAATGCATTTCGGGGA 60 Query 162 GAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAG 221 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 61 GAACCAGCTATCACGGTGTTTGATTGGCCTTTCACCCCTATCCACAACTCATCCCCTCCA 120 Query 222 TTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCAT 281 |||||||| |||||||||||| |||||||| |||||||| ||||||| |||| |||| Sbjct 121 TTTTCAACTGAAGTGGGTTCGGACCTCCACGACGTCTTACCGACGCTTCATCCTGGCCAT 180 Query 282 GGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGC 341 ||||||||||| |||||||||||| || | || |||| ||||||| |||||||||| Sbjct 181 GGATAGATCACACCGCTTCGGGTCTAGAACACGCGACTC--ACGCCCTTATCGGACTCGC 238 Query 342 TTTCGCTACGGCTACCCCA-CACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTC 400 |||||||||| || ||||| |||||||||||||||| || || | | ||||||||||||| Sbjct 239 TTTCGCTACGACTCCCCCACCACGGGTTAACCTCGCCACGCATCACTAACTCGCAGGCTC 298 Query 401 ATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTG 460 ||||||||||||||||||| ||||| || | || |||| ||||| ||| Sbjct 299 ATTCTTCAAAAGGCACGCCATCACC----AC---ACAG--------GCTCTGACGGCTTG 343 Query 461 TAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCT 520 | || ||||||||| ||| ||||||||||| || ||||||||||||||| |||||| Sbjct 344 CATGCGACCGGTTTCAGGAACTCTTTCACTCCCCTCCCGGGGTACTTTTCACCCTTCCCT 403 Query 521 CACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCC 580 ||||||||| | |||||||||||||| |||||||||||| ||| |||||||| | Sbjct 404 CACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGC 463 Query 581 AGATTCACACG 591 |||||||||| Sbjct 464 TGATTCACACG 474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817540291840