Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq934 210 5e-52
>seq934
Length=478
Score = 210 bits (232), Expect = 5e-52
Identities = 283/378 (75%), Gaps = 17/378 (4%)
Strand=Plus/Plus
Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63
|| ||||||| |||| || || | |||||||| | ||| ||||||| |||||| |
Sbjct 97 CCTATCCACAACTCATCCC-CTC-CATTTTCAACTGAAGTGGGTTCGGACCTCCACGACG 154
Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123
| ||||| | ||| || |||| |||| ||||||||| | | | || |||||||| |
Sbjct 155 TC-TTACCGACGCTT-CATCCTGGCCAT-GGATAGATCACACCGCTT-CGGGTCTAGAAC 210
Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATT-CGGTTAA 182
| |||||| ||||||| | |||||||||| ||||||| |||||| | ||| | |
Sbjct 211 AC-GCGACTC-ACGCCCTTATCGGACTCGCTTT-CGCTACGACTCCCCCACCACGGGTTA 267
Query 183 GCTTTGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241
| | ||||| | | ||| |||| | | |||| | ||||||| |||| ||||| ||
Sbjct 268 ACCTCGCCACGCATCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCCATCACCACAC 327
Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCC 301
| ||||| || ||||| | || ||||||||||| || ||||||||||||| ||
Sbjct 328 A-----GGCTCTGACGGCTTGCATGCGACCGGTTTCAGGAACTCTTTCACTCCCCTC-CC 381
Query 302 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTT 361
||||| |||||| || |||||||||||||||| ||| |||||||||| ||| |||||||
Sbjct 382 GGGGTACTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTT 441
Query 362 AGCCTTGGAGGATGGTCC 379
||||||| | | ||||||
Sbjct 442 AGCCTTGCAAGGTGGTCC 459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241559213440
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |