Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1961 161 1e-37 >seq1961 Length=8045 Score = 161 bits (178), Expect = 1e-37 Identities = 155/196 (79%), Gaps = 11/196 (6%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| || Sbjct 3001 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATCCG 2942 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || | |||||||||||||||||||||||| ||| ||||||| ||||||||| || || Sbjct 2941 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGCCCTGGTTCCGCC-CA 2883 Query 126 C-ACCAATGAAGGCATACGGGCTCACCAAGAGGTAGG-----GCTGGGTAATGCAGTACT 179 | ||| ||||||| ||| || ||| |||| | | || || |||| | Sbjct 2882 CGGCCAGTGAAGGCCATGGGGTTCCCCAGGAGGAAAGACCCAGCCGG----ACCAGTGCA 2827 Query 180 CGCCGTGAGGCGGACC 195 |||||||||||||||| Sbjct 2826 CGCCGTGAGGCGGACC 2811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595181058690