Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1961 432 7e-119 >seq1961 Length=8045 Score = 432 bits (478), Expect = 7e-119 Identities = 281/309 (91%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| || | || | || || ||| |||||||||| Sbjct 3481 GAACGAGACCTTAACCTGCTAAATAGCCCGGTCGGCGTCTGCCGGCCGCTGGCTTCTTAG 3540 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 3541 AGGGACTATCGACTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 3600 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct 3601 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGTCCATCACCTTGGCCG 3660 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3661 AGAGGCCTGGGTAATCTTGTTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3720 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||||||||||| || | ||||||||| | | ||||||||||||| Sbjct 3721 CTCTTCAACGAGGAATGCCTAGTAGGCACAAGTCATCAGCTTGTGCCGATTACGTCCCTG 3780 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 3781 CCCTTTGTA 3789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947168884480