Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017-
04-02] 3,285 sequences; 22,591,190 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq704 123 5e-26
seq1458 107 4e-21
>seq704
Length=309
Score = 123 bits (136), Expect = 5e-26
Identities = 176/243 (72%), Gaps = 11/243 (5%)
Strand=Plus/Plus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| ||||
Sbjct 49 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGG 108
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129
||| | ||| | | | |||||| ||||| |||||| || |||| ||| |
Sbjct 109 AAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCGAA 161
Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188
| ||| ||| |||| ||| || | |||| || ||| ||||||||||||||||| |||
Sbjct 162 C--TGC-TGCGGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 218
Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248
||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| ||
Sbjct 219 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 278
Query 249 CCT 251
|||
Sbjct 279 CCT 281
>seq1458
Length=303
Score = 107 bits (118), Expect = 4e-21
Identities = 180/255 (71%), Gaps = 13/255 (5%)
Strand=Plus/Minus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||||||||||| | || ||||||||||||| || | |||||||||| |||
Sbjct 290 GGTGGATGCCTTGGCACCAAGAGCCGATGAAGGACGTTGTGACCTGCGATAAGCCCTGGG 231
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC----CCT-- 123
|||| | | | || ||||||| | | |||||||||||||||| || ||
Sbjct 230 GAGTTGGTGAGCGAGCTGTGATCCGGGGGTGTCCGAATGGGGAAACCTGGAATGTCCGGA 171
Query 124 -TTGGGTCAT-TG--CATGC--TGAATACATAGGTATGCAAAGCG-AACGCGGCGAACTG 176
| | ||| || | ||| ||||| ||||| || | ||||||| ||| ||
Sbjct 170 GTAGTGTCCGGTGGCCCTGCCCTGAATGTATAGGGGTGTGGGTGGTAACGCGGGGAAGTG 111
Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236
|||||||| |||| | | ||||| ||||| ||| | |||||| ||||||||||||||
Sbjct 110 AAACATCTTAGTACCCGTAGGAAGAGAAAACAAGTGTGATTCCGTGAGTAGTGGCGAGCG 51
Query 237 AAATGGGATGAGCCT 251
||| ||| ||| ||
Sbjct 50 AAAGCGGAGGAGGCT 36
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918369830560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |