Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq953 297 7e-78 seq2176 152 2e-34 >seq953 Length=207 Score = 297 bits (328), Expect = 7e-78 Identities = 190/207 (92%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 250 ATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCCGGGGTCTTT 309 ||||||||||||| |||||| |||||||||| ||||||| ||||||||||||||||| Sbjct 1 ATCCTACACAAACAAAACCGAACACCAATACCAAACTATAGTAAAGGTCCCGGGGTCTTT 60 Query 310 TCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 ||||||||||||||| |||||||||||||||||||| ||||||||| ||| | ||||||| Sbjct 61 TCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAATGCAATTTCGCCGAGTCTGTGGT 120 Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 429 |||||||| || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TGAGACAGTAGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 180 Query 430 TTCGCTACCTTAGGATGGTTATAGTTA 456 ||||||||||||||| |||||||||| Sbjct 181 TTCGCTACCTTAGGACCGTTATAGTTA 207 >seq2176 Length=247 Score = 152 bits (168), Expect = 2e-34 Identities = 96/104 (92%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||||| || Sbjct 144 TCGACCTGTCAGTCTCACAGTCAAGCCCCCTTGTGCACTTACACTCACCACCTGATTACC 203 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGG 104 |||||||||||||||||||||||||||||||||||| ||| || Sbjct 204 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACCCTTTAGG 247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702344076160