Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20interdigitale_20[genbank_20GCA_5F900162065.1_202017- 04-02] 3,285 sequences; 22,591,190 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1961 280 2e-73 >seq1961 Length=8045 Score = 280 bits (310), Expect = 2e-73 Identities = 232/279 (83%), Gaps = 17/279 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||| | Sbjct 7553 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCATT 7610 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 7611 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 7670 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 ||| | || ||| || || |||| | ||||| |||||| ||||||| ||||||| ||| Sbjct 7671 GAAAGCGGCGATACCTGCCCCGCACGTTGTAGTTGGATACAAATAGGCCTCGGCCCTGAA 7730 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 ||| | |||||||||| ||| ||| | |||||| |||||||||||||| Sbjct 7731 CCTCAACAGGCCGGCACCGG------CGC-------CTCGGCGCT-AGCTGGCGGATTGC 7776 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| |||||| |||| |||||||||||| |||||||||| Sbjct 7777 AATGTCACCACGCGCGGGGATAAATCCTCTGCAGACGAC 7815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819173930240