Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq226 450 3e-124 >seq226 Length=2389 Score = 450 bits (498), Expect = 3e-124 Identities = 289/314 (92%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| ||||||||||| |||||| || |||| |||||||||| ||| | ||| Sbjct 336 TGGTCCGGCTGGGCCTTTCCTCTTGGGGAACCCCATGGCCTTCACTGGCCGTGG-GCGGA 278 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct 277 ACCAGGGCTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATACAT 218 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 217 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 158 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 157 AATGATTAATAGGGATAGTCGGGGGCGTCAGTATTCGGCTGTCAGAGGTGAAATTCTTGG 98 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 97 ATTTGCCGAAGACTAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGTGA 38 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 37 ACGAAAGTTAGGGG 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915196522240