Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31]
380 sequences; 22,521,034 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq226 450 3e-124
>seq226
Length=2389
Score = 450 bits (498), Expect = 3e-124
Identities = 289/314 (92%), Gaps = 1/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||| ||||||||||| |||||| || |||| |||||||||| ||| | |||
Sbjct 336 TGGTCCGGCTGGGCCTTTCCTCTTGGGGAACCCCATGGCCTTCACTGGCCGTGG-GCGGA 278
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 277 ACCAGGGCTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGGATACAT 218
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 217 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 158
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 157 AATGATTAATAGGGATAGTCGGGGGCGTCAGTATTCGGCTGTCAGAGGTGAAATTCTTGG 98
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
|||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 97 ATTTGCCGAAGACTAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGTGA 38
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 37 ACGAAAGTTAGGGG 24
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915196522240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |