Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31]
380 sequences; 22,521,034 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq211 800 0.0
>seq211
Length=3091
Score = 800 bits (886), Expect = 0.0
Identities = 583/671 (87%), Gaps = 10/671 (1%)
Strand=Plus/Plus
Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 1642 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGCGGGTGGTA 1701
Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139
|||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 1702 AATTTCATCTAAAGCTAAATACCGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 1761
Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|| | |||||||| ||| |||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1762 AGGTTAAAAGCACCTTGAAAAGGGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCG 1821
Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG--GCCGGTGCACT--CTT 255
||||| ||||||| | | | | ||| | ||| | ||| ||| ||||||| |
Sbjct 1822 CTTGCGGCCAGACTCGGGGGGCGGGGTTCAGCGGGCGC-TCGTCGCCCGTGCACTGCCCG 1880
Query 256 CTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCC 315
|| | | |||||||||||||| | ||| ||| ||||||||| |||||||| | |
Sbjct 1881 CTCCC--CGGGCCAGCATCAGCTTCGACGGCCGGTCAAAGGCCCCCGGAATGTGTCGTCT 1938
Query 316 TTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCC 375
| ||| || |||||||| |||||| ||||||||||| | |||||||| ||||||||
Sbjct 1939 CTAGGGACGTCTTATAGCCGGGGGTGCAATGCGGCCCGTCGAGACTGAGGAACGCGCTCC 1998
Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435
|||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 1999 GGCTCGGATGCTGGCGTAATGGCCGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTC 2058
Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495
||||||| | ||||||||| |||||||||||||||||||| | |||||| ||||||||||
Sbjct 2059 TAACATCCACGCGAGTGTTCGGGTGTCAAACCCGTGCGCGCAGTGAAAGCGAACGGAGGT 2118
Query 496 GGGAACCCGTG---AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552
|||| ||| |||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 2119 GGGAGCCCCCCCCCAGGGCGCACCATCGACCGATCCTGAAGTCTTCGGATGGATTTGAGT 2178
Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612
| |||| | || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2179 AGGAGCGTGGCCGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 2238
Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2239 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGG 2298
Query 673 TATAGGGGCGA 683
||||||||||
Sbjct 2299 CATAGGGGCGA 2309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079991849000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |