Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq211 800 0.0 >seq211 Length=3091 Score = 800 bits (886), Expect = 0.0 Identities = 583/671 (87%), Gaps = 10/671 (1%) Strand=Plus/Plus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 1642 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGCGGGTGGTA 1701 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct 1702 AATTTCATCTAAAGCTAAATACCGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 1761 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || | |||||||| ||| |||| |||||||| |||||||||||||||||||||||||||| Sbjct 1762 AGGTTAAAAGCACCTTGAAAAGGGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCG 1821 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG--GCCGGTGCACT--CTT 255 ||||| ||||||| | | | | ||| | ||| | ||| ||| ||||||| | Sbjct 1822 CTTGCGGCCAGACTCGGGGGGCGGGGTTCAGCGGGCGC-TCGTCGCCCGTGCACTGCCCG 1880 Query 256 CTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCC 315 || | | |||||||||||||| | ||| ||| ||||||||| |||||||| | | Sbjct 1881 CTCCC--CGGGCCAGCATCAGCTTCGACGGCCGGTCAAAGGCCCCCGGAATGTGTCGTCT 1938 Query 316 TTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCC 375 | ||| || |||||||| |||||| ||||||||||| | |||||||| |||||||| Sbjct 1939 CTAGGGACGTCTTATAGCCGGGGGTGCAATGCGGCCCGTCGAGACTGAGGAACGCGCTCC 1998 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 |||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 1999 GGCTCGGATGCTGGCGTAATGGCCGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTC 2058 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 ||||||| | ||||||||| |||||||||||||||||||| | |||||| |||||||||| Sbjct 2059 TAACATCCACGCGAGTGTTCGGGTGTCAAACCCGTGCGCGCAGTGAAAGCGAACGGAGGT 2118 Query 496 GGGAACCCGTG---AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552 |||| ||| |||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 2119 GGGAGCCCCCCCCCAGGGCGCACCATCGACCGATCCTGAAGTCTTCGGATGGATTTGAGT 2178 Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 | |||| | || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2179 AGGAGCGTGGCCGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 2238 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2239 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGG 2298 Query 673 TATAGGGGCGA 683 |||||||||| Sbjct 2299 CATAGGGGCGA 2309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079991849000