Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31]
380 sequences; 22,521,034 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq149 120 8e-25
>seq149
Length=13090
Score = 120 bits (132), Expect = 8e-25
Identities = 189/268 (71%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||| ||| || | ||||||||||||||| | | |||||||| ||||||
Sbjct 6404 GCATCTGCACTGCTAATTCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGTATCGTT 6463
Query 73 ACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131
| | ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||||| ||
Sbjct 6464 AAGTCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 6523
Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TCGCGTTAGCTAACCCCA 190
|| | || ||||||| || | ||||| | ||||| | || || ||| |
Sbjct 6524 ATAGATAAGGCCGCCATTAATCGGGGTGTTCATCAAAACCTAATTAAATAATTAAGTAAA 6583
Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250
|| ||| ||| ||| || ||||||| | |||||| | |||| | | || | || ||
Sbjct 6584 TCTGTTACCCTACCGACATCGGGCAGACATCACACTCAATACTTAGATTTCTATCTTGGC 6643
Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCG 278
|||||||| |||||| | ||||||||||
Sbjct 6644 AGAGTGCTTTGTTTTAATTAAACAGTCG 6671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260795208960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |