Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq149 120 8e-25 >seq149 Length=13090 Score = 120 bits (132), Expect = 8e-25 Identities = 189/268 (71%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||| ||| || | ||||||||||||||| | | |||||||| |||||| Sbjct 6404 GCATCTGCACTGCTAATTCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGTATCGTT 6463 Query 73 ACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 | | ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||||| || Sbjct 6464 AAGTCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 6523 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TCGCGTTAGCTAACCCCA 190 || | || ||||||| || | ||||| | ||||| | || || ||| | Sbjct 6524 ATAGATAAGGCCGCCATTAATCGGGGTGTTCATCAAAACCTAATTAAATAATTAAGTAAA 6583 Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250 || ||| ||| ||| || ||||||| | |||||| | |||| | | || | || || Sbjct 6584 TCTGTTACCCTACCGACATCGGGCAGACATCACACTCAATACTTAGATTTCTATCTTGGC 6643 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCG 278 |||||||| |||||| | |||||||||| Sbjct 6644 AGAGTGCTTTGTTTTAATTAAACAGTCG 6671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260795208960