Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31]
380 sequences; 22,521,034 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq149 89.7 2e-15
>seq149
Length=13090
Score = 89.7 bits (98), Expect = 2e-15
Identities = 134/187 (72%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| || || | ||||||| | |||||| ||| | || |||||| |
Sbjct 10953 CAAGTCATCATGGCCAAAATATTGTGGGCTATAGACGTGCCACATTTTTCATTACAAAAG 10894
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425
| | | | | || |||| ||||| |||| ||| || | | |||||||||||
Sbjct 10893 GATGTTATATTGTGAAAATAAGCTAATCCT-TAAATTTGATC--AATATGGATTGTAGTC 10837
Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485
|| |||||||||| ||||| ||||| ||||||||||| |||| || | |||||||
Sbjct 10836 TGTAACTCGACTACATGAATAAGGAATTACTAGTAATCGTTAATCATCACGTAACGGTGA 10777
Query 486 ATACGTT 492
|| ||||
Sbjct 10776 AT-CGTT 10771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503994284800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |