Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq149 89.7 2e-15 >seq149 Length=13090 Score = 89.7 bits (98), Expect = 2e-15 Identities = 134/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || || | ||||||| | |||||| ||| | || |||||| | Sbjct 10953 CAAGTCATCATGGCCAAAATATTGTGGGCTATAGACGTGCCACATTTTTCATTACAAAAG 10894 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | | | | | || |||| ||||| |||| ||| || | | ||||||||||| Sbjct 10893 GATGTTATATTGTGAAAATAAGCTAATCCT-TAAATTTGATC--AATATGGATTGTAGTC 10837 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485 || |||||||||| ||||| ||||| ||||||||||| |||| || | ||||||| Sbjct 10836 TGTAACTCGACTACATGAATAAGGAATTACTAGTAATCGTTAATCATCACGTAACGGTGA 10777 Query 486 ATACGTT 492 || |||| Sbjct 10776 AT-CGTT 10771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503994284800