Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31]
380 sequences; 22,521,034 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq234 367 2e-99
>seq234
Length=2218
Score = 367 bits (406), Expect = 2e-99
Identities = 203/203 (100%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 1059
Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1060 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 1119
Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1120 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 1179
Query 273 ACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||
Sbjct 1180 ACACTTTCATGGTTTGTATTCAC 1202
Score = 125 bits (138), Expect = 1e-26
Identities = 83/92 (90%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||
Sbjct 518 TACTAAATTGAATTACCGTTGCGGCGAACTTCATCAGTAGGGTAAAACTAACCTGTCTCA 577
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 578 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854396753280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |