Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq234 367 2e-99 >seq234 Length=2218 Score = 367 bits (406), Expect = 2e-99 Identities = 203/203 (100%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1000 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 1059 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1060 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 1119 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1120 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 1179 Query 273 ACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||| Sbjct 1180 ACACTTTCATGGTTTGTATTCAC 1202 Score = 125 bits (138), Expect = 1e-26 Identities = 83/92 (90%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||| Sbjct 518 TACTAAATTGAATTACCGTTGCGGCGAACTTCATCAGTAGGGTAAAACTAACCTGTCTCA 577 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 578 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854396753280